Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3160 |
Symbol | |
ID | 3721452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 211433 |
End bp | 212428 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640072837 |
Product | HlyD family membrane fusion protein |
Protein accession | YP_354677 |
Protein GI | 77465174 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGCG CCCTCCTTCC CTTCCTCCTC GCACCGGCGC TGGCCTGTGC GCCCGCGATG GCCGAGACGC CGTTCGAGAA GCTCAAGGCC CGCTTCTTCG CCGAGGAGAC CGAGGGCATC GCGCGCTCGA ACGGGCGGAT CGAGGCGCAG ACGGTGGATG TGGCGGCCAA GCTCGCCGGG CGCGTGACCG AGGTGCTGGT CGCGGAGGGC CAGATCGTGT CGCCCGGCGA TCCGGTCGCG CGGCTCGACG ACCGCGATGC GCAGGCGCAG CTTCTGGCGG CCAAGGCCGC GCTCATGCGC GCCCACGCGG GCAAGAGCGT GGCCGAGGCG AGCGTGGCGC AGGCGGACAG CGCGCTCACC GTGGCCGAGA CCAACCGGGA CCGGGTGGTG CAGCTGCACG CCGACAAGCA TGTGTCGGAC GCGGTGCGCG ACGATGCGGT CAATGCCGCC GTCTCGGCCG AAGCGGCGCT GAAGATGGCC CGGGCGCAGG TGACGGAGTC CGAAGCGCTG ATCGCTGCCG CCGAGGCCGA CCTCGCCCGC GCCGAGATCG CGCTCGAGGA TCTGACGATC GCGGCCCCGG TGCGCGGGCG CGTGGTCTAC CGGCTGCGCG AGCCGGGCGA GGTGGTGGCG GCCGGCGCGG CGGTGGTCTC GATCCTCGAC CTCTCCGACG TCTACATGAA CATCTACCTG CCCGCCGCCG ACGTGGGGCC GCTGGTGCTG AACGACGAGG CGCGGCTGAT CCTCGATCCG GTGCCGCGCT ACGTCATCCC CGCCACCGTC ACCTTCATCT CGCCCGAGGC GCAGTTCACG CCGAAGTCGG TCGAGACCGC CTCGGAGCGC GAGGATCTGG TGTTCCGGGT GAAGCTCCGG GTGCCGCCCG AGCTGCTCTC CCGGTTCGAG ACCCAGATCA AGACCGGCGT CCGCGGTCTG GGCTTCGTGC GCACCGAGCC CGGCCGCGAC TGGCCCGCCG ATCTGGCCGT GAAGCTGCCG GACTGA
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Protein sequence | MMRALLPFLL APALACAPAM AETPFEKLKA RFFAEETEGI ARSNGRIEAQ TVDVAAKLAG RVTEVLVAEG QIVSPGDPVA RLDDRDAQAQ LLAAKAALMR AHAGKSVAEA SVAQADSALT VAETNRDRVV QLHADKHVSD AVRDDAVNAA VSAEAALKMA RAQVTESEAL IAAAEADLAR AEIALEDLTI AAPVRGRVVY RLREPGEVVA AGAAVVSILD LSDVYMNIYL PAADVGPLVL NDEARLILDP VPRYVIPATV TFISPEAQFT PKSVETASER EDLVFRVKLR VPPELLSRFE TQIKTGVRGL GFVRTEPGRD WPADLAVKLP D
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