Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3146 |
Symbol | ttdA |
ID | 3721438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 195681 |
End bp | 196643 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640072823 |
Product | fumarase alpha subunit |
Protein accession | YP_354663 |
Protein GI | 77465160 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTCAC TCGATCTGAT CCAGCGGACG GCCGAGCGGC TGATGGAAAA GGCCGCCATC GAAATTCCCG AAGATTATCT CGACGGGCTG AAGGCCACGG CGGCGGTCGA GGATGGCGAC CTTTCCTCCT TCGTGCTGCA GGCCATGCTC GAGAATTACG AGGCGGCCAA GGAGGACCGC CGCGCGATGT GCGGCGACAC GGGCTGTCCG CGCTGGTATG TGAAGATGGG CAACGAGGCG CATATCGAGG GCGGGCCCAT CGCGCTCGAG GCGGCGCTGC GCCGTGCCAC GGCGCGCGCC ACGCATGACA TCCCCCTGCG GCCGAACCGG GTCCATCCGC TCTGGCGGAC CGACCACGAC AACAATGTGG GCATCGGCGC GCCCGAAATC GAATATGGCT TCGAGCCGGG CGGCGACTGG ATCGACCTCA TCACCGTGCA CAAGGGCGGG CTCTTCGGCA CCGATTACCG GATGCTCTTC CCCTCGGACG GGATCCAGGG GATCCGGCGC TTCTTCCTCG ACAGCCTCGT GGCCTTCGGC AAGCGCGGCC TCGCCTGCCA GCCCGCCATC ATCGGCATCG GGCTCGGCGG GTCGAAGGAT GCCTGCATGG TGCTGGGCAA GCGCGCGGCC TGCCTGCGCA CCGTGGGCAG CCGCAACTCC GATCCGCGCA TCGCGGCGCT CGAGGGCGAG CTGAAGGAAC TCGGCAACTC GATCGGCATG GGCGCCATGG GCTTCGTGGG CAAGTCCATG GTGGTCGATT GCAACATCGA GGTGGGCTAC TGCCACACGG GCGGGATGCA GATGAGCGTC CATGCCTTCT GCCTCTCCTC GCGCCGCGCC GTCGCGCGCC TCTGGGGGGA CGGTCGCGTC GAATACCGCA CCGACCCCGA CTGGTTCACC GATTATCAAC GCCGGGAGAC AGTGGAATGG ACCGTTCCGC AGGACCAAAA CGAATTCGCC TGA
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Protein sequence | MISLDLIQRT AERLMEKAAI EIPEDYLDGL KATAAVEDGD LSSFVLQAML ENYEAAKEDR RAMCGDTGCP RWYVKMGNEA HIEGGPIALE AALRRATARA THDIPLRPNR VHPLWRTDHD NNVGIGAPEI EYGFEPGGDW IDLITVHKGG LFGTDYRMLF PSDGIQGIRR FFLDSLVAFG KRGLACQPAI IGIGLGGSKD ACMVLGKRAA CLRTVGSRNS DPRIAALEGE LKELGNSIGM GAMGFVGKSM VVDCNIEVGY CHTGGMQMSV HAFCLSSRRA VARLWGDGRV EYRTDPDWFT DYQRRETVEW TVPQDQNEFA
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