| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2880 |
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| Symbol | gfdS |
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| ID | 3720620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 1550207 |
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| End bp | 1552408 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640071066 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_352942 |
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| Protein GI | 77463438 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTTG CTCTGATCGA TCCCAGCGAT CCGCCCGAGC GACAGCGGGA CAAGCTTCTC
GAGATCGTGC GCGCGCTGAT GGCGCGGGTG GAGCGCACGA CCGACGACGG CGGTGCGGCC
TATGCGCAGT TCCAGCGCGC CGCCATGCTC GAGGATCAGG TGCGCGAGCG CACAGCGGAT
CTGCAGCGCA CGCTGGAACT GCTGAACCTC TCGAACGAGC GGCTGGCGGA AGCCACGCGC
GCGGCCGAGG AGGCGCGCCA GAACCTCGCC AATGCCATCG AGACGGTGCA GGAGGGCTTC
GCGCTCTTCG ATGCCGACGA TGTGCTCGTG CTGTGCAATT CGCGCTTCGG GATGCACATG
CTCGACATTC AGGAGCATCT GAAGCCCGGC CTCTCCTTCG GCGGCTATAT CGACCGCGTG
AGCCGTTCGC GGTATCTGGC GCTGCCCGAG GCGGAGACAC CCGAGGATTG GGCGGTCCGG
CGCAAGCGGC GGCACTACGA CCGGCATTCG ATCTTCAACG TGCGGCTGAT CTGGGACCGC
TGGCTGCAGG TCTCCGAGCA TCGGACGGCC GATGGCGGCA CGGTGATCCT GCAGACCGAC
GTGACCGACC TCATCCGCAT CGAGCGGCTC GAGCGCGGCA AGATGCTCGA CGATCAGGCC
CGCGTGATCC GCGCGACGCT CGATCACATC AATCAGGGGG TCTGCATCTT CGATGCCGAG
GGGCGGCTCG TCGGCTGGAA CCAGCGCCTC GGCTCGCTGC TCGCGATCCC GATGAACCGC
TTCCGGCTGG GGGTGAGCTT CGGCTACCTG CTCGAACGGT TCGCGCACGA GATCAGCTTC
GGCGAGGGCA TGGATGCGGC CCATCTCGAG GCCTGGGTCC AGGCGCGCCA CGAACGCGCG
CCGCTCTCTT TCGAGCTCCG CCGCCACGAC GAGCTGATCC TCGATGTCTT CGCGCAGGAG
ATGCCCGACC GCGGCTTCGT GATGAGTTTC ACCGACGTCA CCGCCGAGCG GGCCGCCATC
GAAGCGCTGA GCCGTGCGAA CGAAACGCTC GAGGCGCGGG TGATGGAGCG GACGCTGGAG
CTCGAGGATG CGCTGGGTCA TGCCGAGCGG GCCAATGCCT CGCGCTCGCG CTTCGTGGCG
GCGGCGAGCC ACGATCTGTT GCAGCCGCTG TCGGCGGCCA AGCTCTTCAT CGCCACCATC
GGCGACGAGG CGGTGGCGCC CGAAAGCCGC GAGGCGCTGA CCAAGGCGCA GAAGGCGCTC
GACTCGGTGG AGGGGATCCT CGGCGCGCTT CTCGACATCT CGAAACTCGA GTCGGGCCGG
GCGGCGGTCT CGATCCAGCC GGTGCGCCTC GACCGGCTGA TGGCGCAGCT CTCCGACGAA
TTCGCGCCCA TCGCCGCGGC GCGCGGCCTC CGGCTCACGG TGCTGCCCTC GAGCGCGGTG
GTGGCCTCCG ACCCGACCTA TCTCCGGCGG ATCCTCCAGA ACCTGATCGG CAATGCGATC
CGCTACACCG CGAAGGGCAG GGTGCTTGTC GGCGCGCGGA TGACCGCGGG CATGGTGCGG
CTGGAGGTCT GGGACACCGG GCCGGGGATC GCCGAGGCAG ATCAGGAGGC CATCTTCAAG
GAGTTCCACC GGCTCGACGC GCCCGCCTCA CCCGCCGAGG GCATGGGGCT GGGCCTCGCC
ATCGTCGAGC GCGCCTGCGG GCTTCTGGGC CATCCGCTGG GGCTCCGATC CGAGATCGGG
CGGGGCACCT GCTTCATGCT GCAGGTGCCC CGCGCCGAAA GTGCGCCCGC TCCGTCCGTG
CCCGATGCCT CGGCGGTGCG GGCGCAGGCC AAGGTGGCGG TGCAGGACAA GATCGCCTTC
CTCGTCGAGA ATGACGACGA CCTGCGTCAG GCGATGGGAC TGCTGCTGGA GAAATGGGGG
GTGAGCGTGC TCGACGCGCC CTCGGGCGAG GAGGCGCTGG CGCTGATCGA GGAGATCGGG
ATCCTGCCGG ACTTCTTCCT CGTGGACCAG CAGCTCGGCG CGGGCATGAC GGGGGTGGAG
TTCATCCGCA CGATGCGCGA CCGGCACGGG CCGGTGCCCG CCTGCATCGT GACCGCCGCC
CGCCGCCCCG AAGTGGCCGC CCTCTGCGCC GAGACGGGCA TCCGGCTGAT CCAGAAACCC
ATCGACGCCC GCGTGCTCGA GGAGTTCCTG CGCGCCCTCT AG
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| Protein sequence | MSLALIDPSD PPERQRDKLL EIVRALMARV ERTTDDGGAA YAQFQRAAML EDQVRERTAD
LQRTLELLNL SNERLAEATR AAEEARQNLA NAIETVQEGF ALFDADDVLV LCNSRFGMHM
LDIQEHLKPG LSFGGYIDRV SRSRYLALPE AETPEDWAVR RKRRHYDRHS IFNVRLIWDR
WLQVSEHRTA DGGTVILQTD VTDLIRIERL ERGKMLDDQA RVIRATLDHI NQGVCIFDAE
GRLVGWNQRL GSLLAIPMNR FRLGVSFGYL LERFAHEISF GEGMDAAHLE AWVQARHERA
PLSFELRRHD ELILDVFAQE MPDRGFVMSF TDVTAERAAI EALSRANETL EARVMERTLE
LEDALGHAER ANASRSRFVA AASHDLLQPL SAAKLFIATI GDEAVAPESR EALTKAQKAL
DSVEGILGAL LDISKLESGR AAVSIQPVRL DRLMAQLSDE FAPIAAARGL RLTVLPSSAV
VASDPTYLRR ILQNLIGNAI RYTAKGRVLV GARMTAGMVR LEVWDTGPGI AEADQEAIFK
EFHRLDAPAS PAEGMGLGLA IVERACGLLG HPLGLRSEIG RGTCFMLQVP RAESAPAPSV
PDASAVRAQA KVAVQDKIAF LVENDDDLRQ AMGLLLEKWG VSVLDAPSGE EALALIEEIG
ILPDFFLVDQ QLGAGMTGVE FIRTMRDRHG PVPACIVTAA RRPEVAALCA ETGIRLIQKP
IDARVLEEFL RAL
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