| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2809 |
|---|
| Symbol | |
|---|
| ID | 3720583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1505485 |
|---|
| End bp | 1506585 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640071029 |
|---|
| Product | ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_352906 |
|---|
| Protein GI | 77463402 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.59078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTTCAG ATCGACCGAC CCCGTCTTCC GTGCCCCTGC GCGGACGACT GACCATCGAG
ACGCTTCCCG AGACGCAGCG CAGCCTCGGC TCGGTCGGGG CCGGGGAGCA GATCGACATG
GCCGCGGTGG AGGCGCTCGA CACGGCGGGG GCCTGGGCGC TCCTGCAGGC CCAGAAGCGC
GCCGAGGCGG CGGGGCAGGC GCTCGAGATC GTCAATCTGA GCGAGTCCCA CCGCCATCTC
CTCGAGACGG TCGCGGCGGC CATGCCCGAG CCCGAGCGGC GGCGGCGCAC GATCCCGGGG
CGGCCGGACG ACGGGCTCGC CAACCTCGGT CAGGAGGTGG CGCAGGGCCT GCGCGGAAGC
CTGACCTCCG TTGGATTCTT CGGCGAGGTG GTGACCCATC TCGGCGCACT CGTCCTGCAT
CCGACGCGTC TCAAGCTGAC GCCGCTCGTC CATCACATGC AGGAGGCGGG CTGGAACGCG
GTGCCCATCG TCTCGCTCAT GGGGTTCCTG ATCGGCATCG TCTTGGCCTT CCAGGGCTCG
ACGCAGCTCA AGTCCTTCGG AGCGGAAGTC TATGTGGTCG ATCTCGTGGC CATCTCGATC
CTGCGCGAAC TGGGCATCCT GCTGACCGCG ATCATCGTGG CCGGACGCTC CGCCTCGGCC
TTCACCGCGG CCATCGGCTC GATGAAGATG CGCGAGGAGA TCGACGCGAT GCGCGTTCTG
GGCCTCGATC CGATCGACCG GCTGGTGCTG CCGCGGCTGA TCGCGCTAGT CATCCTGCTG
CCCGCGCTCG GGTTCATCGC CTCTCTGGCG GGCCTCGTGG GCGGGGGGCT GATGGCCTGG
ATCGACCTCG GCATCACGCC GGGCATGTTC CGCACCCAGC TTCTGGCCGA TACCGATGTC
AGCCATGCGA TCATCGGGCT GGTCAAGGCG CCCTTCTTCG CCGTCATCAT CGCTGTCATC
GGCTGCCATC AGGGAATGCA GGTCTCGGGC AATGCCGAAT CGCTCGGCAG CCACACGTCG
CGCTCGGTCG TTCAGGCCAT CTTCCTGGTC ATCGTCGTCG ATGCGCTCTT CTCGATCTTC
TTCGCGGTCT GGGGGCTCTG A
|
|---|
| Protein sequence | MVSDRPTPSS VPLRGRLTIE TLPETQRSLG SVGAGEQIDM AAVEALDTAG AWALLQAQKR
AEAAGQALEI VNLSESHRHL LETVAAAMPE PERRRRTIPG RPDDGLANLG QEVAQGLRGS
LTSVGFFGEV VTHLGALVLH PTRLKLTPLV HHMQEAGWNA VPIVSLMGFL IGIVLAFQGS
TQLKSFGAEV YVVDLVAISI LRELGILLTA IIVAGRSASA FTAAIGSMKM REEIDAMRVL
GLDPIDRLVL PRLIALVILL PALGFIASLA GLVGGGLMAW IDLGITPGMF RTQLLADTDV
SHAIIGLVKA PFFAVIIAVI GCHQGMQVSG NAESLGSHTS RSVVQAIFLV IVVDALFSIF
FAVWGL
|
|---|
| |