| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2568 |
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| Symbol | sqdD |
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| ID | 3720201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 1212607 |
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| End bp | 1213389 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640070745 |
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| Product | glycosyl transferase (sulfolipid biosynthesis) protein |
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| Protein accession | YP_352626 |
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| Protein GI | 77463122 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5597] Alpha-N-acetylglucosamine transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAATG CCGATTATGC GCTGGGGGCA CGGGCGCTGC TGCGCTCGCT GGCCCTCAGC
GGCACCACGG CCGACCGGGT GGTGCTGCAT ACCGACGTGC CCGAGGAGGC GCTGGCGCCG
CTCCGGGCGC TCGGCGCGCG GCTCGTGCGG GTGGAGCTTC TGCCCACCTC GCCCGAGTTC
AACGCGGCCC ATGCGCGAGA GGCGCTTCAT GCGCGCGCGG CCTTCACCAA GGGCGGCAAG
CCGCCCTTCC ACACGCCGCT CGATAATTTC GCCAAGCTCC GGCTCTGGCA GCTCGTGGAC
TATCGCTCGG TCGTCTTCAT CGACGCGGAT GCGCTGGTGC TGCGGAACGT GGACCGGCTG
TTCGACTATC CCGAATTCTG CGCCGCGCCG AATGTCTACG AGAGCCTGTC GGACTTTCAC
CGGATGAATT CGGGCGTCTT CACCGCCCGG CCCTCGACGG ACACCTACGC CCGGATGCTC
GAAGCACTCG ACGTGCCGGG GGCCTTCTGG CGGCGGACCG ACCAGAGCTT CCTGCAGCAG
TTCTTCCCCG ACTGGCAGGG CCTGCCGGTC TTCTGCAACA TGCTCCAGTA TGTCTGGTTC
GCGATGCCCG AGCTCTGGAG CTGGGAGCAG ATCCGCATCC TGCACTTCCA GTATGAGAAA
CCCTGGCAGG AGCACGACAA GGCCGACCGC CTGCGCCCGC TGATCGACCT GTGGCGCGCC
TATGCGGGCG ACGGGCCGGT GCCCGCGCTT TCGGACATGC CGGATCCATG CGGCTTGCGC
TGA
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| Protein sequence | MTNADYALGA RALLRSLALS GTTADRVVLH TDVPEEALAP LRALGARLVR VELLPTSPEF
NAAHAREALH ARAAFTKGGK PPFHTPLDNF AKLRLWQLVD YRSVVFIDAD ALVLRNVDRL
FDYPEFCAAP NVYESLSDFH RMNSGVFTAR PSTDTYARML EALDVPGAFW RRTDQSFLQQ
FFPDWQGLPV FCNMLQYVWF AMPELWSWEQ IRILHFQYEK PWQEHDKADR LRPLIDLWRA
YAGDGPVPAL SDMPDPCGLR
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