| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2321 |
|---|
| Symbol | |
|---|
| ID | 3719852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 944312 |
|---|
| End bp | 945637 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640070494 |
|---|
| Product | TRAP-T family transporter |
|---|
| Protein accession | YP_352376 |
|---|
| Protein GI | 77462872 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
|---|
| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTACG AGATGATCGC CATCCTGATG TTCTCGGCCA TGCTGCTCAT GATGCTGACC
GGGCAGCGCG TCTTCGGCGT GATCGGCTTC GTGGCCGTGG TGGCCTCGCT CGCGCTCTGG
GGCACGGGCG GGCAGAGCAT GGGCTTCTCG GCCGCGATGA AGCTCATGAA ATGGTATCCG
CTGCTGACGC TGCCCATGTT CATCTTCATG GGCTATGTCA TGAGCGAGAG CCGCCTCGCC
GACGATCTTT ACCGCATGTT CCATGTCTGG TTCGGCCCCG TGCCCGGCGG CCTTGCCATC
GGGACGATCC TCCTCATGGT GCTGATCTCG GCCATGAACG GCCTTTCGGT CGCGGGCATG
GCCATCGGCT CGACCATCGC GCTGCCCGAG CTTCTGCGGC GGCGCTACGA CAAGCTGATG
GTGACGGGCG TGATTCAGGC GGGGTCGAGC CTCGGCATCC TGATCCCGCC CTCGGTGGTC
CTCGTGCTCT ATGCGATGAT CGCGCGCCAG CCGGTGGGGC AGCTCTGGCT GGCCGGCGTG
GTGCCGGGGC TGATGATGGC GGGCATGTTC GTGGCCTACA TCTGGCTCCG CTGCCGGCTG
AACCCCGCGC TCGGCCCGGT GCTGCCGCCC GAGGAACTGG CCGCGGTGCC GCGGTCGGAA
AAGATGCGCC TGCTGGCCGC CGGTCTCCTG CCGCTCGGCA TCTTCGCCGC GATGATGGTG
CCCTTCGTCA ACGGCTGGAC GAGCCTCGTC GAAAGCTCGG TGATCGGGGC GCTGGTGACG
GTGCTGGCCG CGGTCGTGAA GGGCCGCTTC ACCCGCGAGG TGTTCGAGAC CTCGACGCGG
GCGACGCTCG CCATCTCCTG CATGTTCATG TGGATCATCC TCGCGGCGCT GGCCTTCGGC
GCGGTCTTCG ACGGTCTGGG CGCCGTGCGC GCGATCCAGG GCTTCTTCGT CGACCGGCTG
GAGCTGTCGC CCTGGACCAT CCTCATCATG ATGCAGCTCT CCTACCTCAT CATGGGGATG
TTCCTCGACG ACACGGCGAT GCTCGTCATC GTCGCGCCGC TCTATGTGCC GCTGGTGGGG
GCGCTGGGGT TCGATCTGAT CTGGTACGGC GTGCTCTACA CGATCACCTG TCAGGTGGCC
TATCTCACGC CGCCCTTCGG CTACAACCTG TTCCTGATGC GCGCCATGGC GCCGCCCGAG
ATCACCATCG GCGACATCTA CCGCTCGATC GTGCCGTTCG TGGGGGTCAT GGTGCTGGCG
CTGGTGCTGG TGATGGCCTT CCCCGAGATC GCGCTCTGGC TGCCGGAGAC GCTCTACGCC
AAGTAA
|
|---|
| Protein sequence | MSYEMIAILM FSAMLLMMLT GQRVFGVIGF VAVVASLALW GTGGQSMGFS AAMKLMKWYP
LLTLPMFIFM GYVMSESRLA DDLYRMFHVW FGPVPGGLAI GTILLMVLIS AMNGLSVAGM
AIGSTIALPE LLRRRYDKLM VTGVIQAGSS LGILIPPSVV LVLYAMIARQ PVGQLWLAGV
VPGLMMAGMF VAYIWLRCRL NPALGPVLPP EELAAVPRSE KMRLLAAGLL PLGIFAAMMV
PFVNGWTSLV ESSVIGALVT VLAAVVKGRF TREVFETSTR ATLAISCMFM WIILAALAFG
AVFDGLGAVR AIQGFFVDRL ELSPWTILIM MQLSYLIMGM FLDDTAMLVI VAPLYVPLVG
ALGFDLIWYG VLYTITCQVA YLTPPFGYNL FLMRAMAPPE ITIGDIYRSI VPFVGVMVLA
LVLVMAFPEI ALWLPETLYA K
|
|---|
| |