Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2059 |
Symbol | |
ID | 3719448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 651823 |
End bp | 656844 |
Gene Length | 5022 bp |
Protein Length | 1673 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640070222 |
Product | phage tail tape measure protein |
Protein accession | YP_352110 |
Protein GI | 77462606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGAGGC TTCCCATGTC GGCAGTCATC GGCGCACTCC GGGTCAACCT CGGCCTCGAC AGCGCAGAGT TCCAGAAGGG CCTGAAGAGG GCGCAGTCCT CGCTCGGGGC GGCGGCGAAG GCCTTCGGCG CGCTCTCGGC CATCGGCGCC ACGGTCGGCG CCGCCATGAC GGGCATCGTC GTGCCGACCG CCCGCGCGGC GAACGAGATC TCGCGGCTGG CGCAGGTCGC GAACACCACG CCCGGGACGC TGCAGCGCTG GTCCGCCACC TCGAAGAGCG TGGGCATCGA GCAGGAGAAG CTCGCCGACA TCCTGAAGGA TGTGAACGAC AAGGTGGGCG ACTTCCTCTC GACCGGCGGC GGCGAGATGA AGGACTTCTT CGAGAAGATC GCCCCGAAGG TCGGGGTCAC GGCGAAGGAG TTCCGCAATC TGTCGGGGCC GCAGGCGCTG CAGCTCTATG TCTCGAGCCT CGAGAAGGCC GGCGTCTCGC AGGCCGAGAT GACCTTCTAC ATGGAGGCCA TCGCCAATGA CGCGACCCTG CTGCTCCCCC TTCTGCGAAG CAACGGCGCC GAGATGGAGC GGCTCGGGGA CCAGGCGGCC GACCTCGGCG CGATCCTCGG CGACGATGCG GTGGCGGCCC TCCGCGACGC CCACCTCGCG CTCGGGCAGA TGGCCACGGC GGTCTCGGCC GCCCGCGACC GGATCGCGGC CGAGCTCGCC CCCGCCGTCC AGGCCATGGC CGTGGCCTTC ACGACCTCGA TGCGCGAGGG CGGGCTGCTG CGCGGCGTGA TCGACGGGAT CGGTTCGGTC GCGGGCGCGG TGGCGGACAA CATCGACCGG CTCGCGGTCT ACACGGCGAC GGCGGCCGCG GCGCTCGCCG TCTCCATGAC CCCGGCCCTG ATCGTCGCCA CCCGCGCGGC GTGGGCCTTC GTGGCCGGAT TGGTCGCGAC GCGGGCGGCC CTGATCCGCA CCGGCCTCGG CATCGCCGTG GTCGCGGTGG GCGAGCTGGC TTATCAAGTG ACGCGCACGG TCAAGGCGGT GGGCGGTCTC GGCAATGCCA TGGAGATCAT GGGCCGGGTC GCGAGGGGCG TCTGGGAGGG GATGAAGACC AGCGCCACCG CTCTCGGCCC GGCGCTGAAC GCGGTCTGGA AGACGGTCGA GGCGGGCTTT CTGACCATGA TCGCCGCCGT CGCCCGCAAA TGGACCGACT TCCTGCGCGA CCTGTCGCAG GGCATGGCGG CCGTCCCCGG CATGGGCGAG GCGGCGCTCG AGGTGGGCAA CATGGCGATC CTGGCCGGGT CCGGGGTCCA TGCCCTGACC TCGGCCGCCC GGGGCGCGCG CGACGAGGCG CAGGCGCTGA AGGAGGAGGC CCGGGCGCTG GCCTCCGAGG GCTTCGACGC CGCCGCTGCC GCCGCGGCCG AGCTGCGCTC CGCGGTGACG GGCACCGGGG AGGCCGCCGA CGGGGCGGCG GCGCCCGTCT CCGACCTCGG CGACAACGTG TCGGATCTGG GCGCCGCCGC GGGCGGGGCG AAGCAGAAGC TCTCCGATCT GGTCACGGCC GCGAAGGCGT GGAAGGAGCG GCTGAAGACG CCGGTTCAGA AGTACCGCGA GGAGATCGCG AAGCTCGGCG AGCTCTCGAA GAAGGGCCTG CTCTCGGCCG ACGAGCATCG GCGCGCCATC GGAGAGCTGA ACCGGGAGCT CGGCGAGGGC ATTCCGATCA TCGGCGATGT GGCCACGGCC TGGGGCGAGT TCGTCACCGG CGGGTTCAAG GACTTCAAGG GCTTCGTGAG CAACGTCCTC GGGAGCTTCA AGAGCATGCT GGCCGAGATG ATCGCCACGG CGGCGCGTAA CCGGATCGTC ATCGGGATGG GGCTCGGCGG CGGTGGCGTC GCCGGCACCG CGGCCGCGGC GGGCGTGCCG GGCATGGGCG GCGGCGGCCT CGGGATGCTG GGGAGCCTCT TCGGTGGTGG CGGCGGTGGC GGGGTCCTTG GCATCGGCAA TGCCTTCAGC GCCTTCGGCA GCGGGGCTCT GGGCTCGCTC GGGAACTTCT TCTCCGGCGG CCTCTCCGGG GGCTTTGCCT ATATCGGCCA GTCGCTCAGC ATGGCGACGA GCGGTCTTGT CGGCTTCGCG CAGGCGGCGG GCGCCATTCT GGGCCCCATC GCCGCCGTGG CGGCGGCCGT CTCCTTCTTC GGCTCGAAGA CGAAGCTCCT CGATGCAGGG CTGCGCGTCA CCGTGCGCGA GCTGAATGCC ATGGTCGAAA CCTACAAGAA GGTGGAGAAG TCCCGGTTCG GCGGGCTCTC GAAGTCGCGG CGCACCAGCT ATGGCCTCGC AGACGGGGCG GTGGCGAGCC CCATCGTCAA GGCCGTGAGC CAGATGCAGG CCTCGGTCAT GGATGTTGCG GACACGCTCG GCATCGGCGC CGAGGCCTTC AAGGGCTTTG CGGCGTCTGT GAAGTTCTCG ACCAAGGGGC TCTCCGACGA GGAGATCGGC GCGAAGCTGC AGGAGAAGCT GACCGAGCTC GGCGACAGCT TCGCCGCGCG CGCCTTCGGC TATGTCGGAA AGAACGACCA GGCGATCAAG GATCTCGAGA AGCGGATCGC CGAGGGGACG TCCGATGCGG TGGTGAGCGG GCTCAAGGGG TCCATCGGCG ACCGGCTTCT CTCCGCCTTC TTCGGCCGGA AGCGGCAGGG CGATCTGGCA GACCTGATCG CGGGCAACAG CCTCGTCTCG ACCCGCCCCG AGCTCGCCGC TCTGGTGAAG GAGGGCGAGA GCTTCGTCGA GGCCCTGCAG CGGCTGAGCG CGGCGATGAC CGGGGTCAAC GGCGTCATGG ACACGCTGGG CATGAGCTTC CGGGCGGTGG ACATGGTGAC CGCCGGCATG GCCTCGGATC TGGCCGCGCT CTTCGGCGGG CTTGAAGGAA TGGTCTCCGC CACCTCCTCC TATTACCAGG CCTTCTATAG CGAGGCCGAG CGGATGGAGA CCGCGACGCG GCAGGCGACC GAGGCGCTGG CCAAGCTGGG CGTGGCGCTG CCCGCGACCC GCGCCGAATA TCGCCGGCTG GTCGAGGCGC AGGATCTCAC CACCGAGCGG GGGCGCGAGC TTTACGCGGC CCTCGTGGGC ATGGCGGGCG TCATGGATCA GATCCTGCCG AGCGTGGCGA GCCTCTCGGC CGAGCTGGCG GGCCTCGTGG GCACGATCAG CACGGATCTC GACGGGATGA TCTCCGGCGC GGCCGAGGCG CAGCGGGGGG CGGCCGCGGC GGCGAAGGGC TGGTATCAGG TCACCGTGGC GCTGCGCGAC TATATCGGCG ATCTGCGCAG CGCGGCCTCC GAGCTGATCT CGCCCGCGGT GGCCGCGGCC CAGTCGCAGG CGCGCTATCA GACGATGCTG GCAAGCGCGA TGGCGGGCGA TCAGGAGGCG GCCAAAGCCG TCTCCGGCGC GGCCTCGGCC TATATCGAGG CGGTGCGCGG GCAGGCCCGG TCGGCGGTGG ATGTGGCCCG CGCGCAGGCG CAGGTGCTCT CCGACCTGCA GCTCCTGCAG GGCGTGACCG GGCTTGAGGG GGCGAAGGAG GATGTGCTGG CCAGCCTCTA TCGGGAGCAG GTCGATCTCC TGACCGAGGT GCGCGATTAC CTCGCCGGCG GCGAGGCGTT GAAGCCCGAG CAGATCGCGG CGCTGAACGC GCAGCTGGGC TCGCTCGAGG GCGCCATCGC GGCGGCGAAG GAGATCTCCT ACGCCGCCCT CCGCGAGCGG ATCGACGTGA CCGTGGGGCT GATGGCGACG GCGGACATCC CGGCCGACCT GCGCCGCATC CTGAAGAATG CCACGAGCGG CGTCGAGGTC TCGCTCGACA TGGTGCTGCG GCGGATGGAT CTCACGCCGG ATCTGGTCTG GATCGCGGCG AAAGCCTCCT CCGACCACCT CGCGCGCATC AGCTATCTAG CGAAGACCGA CGCGCTGCCC GACGATCTGC GCGCGCTCGC CGCCGTTCGC GTGGCGCAGT CGGTGCGCCG GCTCGCGCTG GTGATGGACA AGCCCGCCTC CGATCTCGGC ATGGCGGAGC TCCTCAAGGC CCTCGGCGCC CAGGGCGGCC GGATCACCCT CGGCGGCAGC TTCGCCTTCG ACCCCTCGAC CGGCTTCTCG AGCTGGTTCG AGACCACGAC GAGGGGGGCG ATCACGGCGC CGATGACGGC GCTGCGCACG GCACTCGACG ATCTGAGGGA CGCGATCCTC GCGGAAGGGC GCGCGGCCGG GCAGCGCGAG CGCGGAGCGG CGCTGTCGGC CTTCGCCGGG GGCCTCGCGA CGAACGCGGC CGGCGACATC CTTGCCACCG ACAAGCAGAT CCTGGCGATG GCCGCCAAGG CCGGGATCTC GACCGACGGC AAGACCATCG GGCAGGTCAT GCGGGCCATC GAGGGCTTCT CCCCGCTCGA CGGGATCGAG ACGATCCGCC GGCTGCCGGG GAGCCTGAAG GACTACCTCT GGGGCCTCTT CCAGCAGCGG CAGGGCCGGA TCCCGCTCGA TACAGCCGAT TATCTGCGGC TCTACCCGGA CGTGGCCGCG GACGAGTACG GCTACGACCC GACCATCCAC TACCGCAACC ACGGCCGTGA GGCGATCCTC GCGGGGCTGC GGCCGTTCAA GCCGGAGGTG TTCGACTGGT CGGCCATCGG CCTCGACGTC CCGGGCTTCG CCGCGGGCGG CCTGCATGCG GGCGGCCTGC GCCTCGTGGG CGAGCTCGGG CCCGAGCTCG AGGCCACCGG CCCGAGCCGG ATCCACAGTG CGGGGCGGAC CGCGGACATT CTCGGCGGCG CCGCCATGGG CGCCTCCGAG GTGGCCGGCG CCGTGCGCGA TCTGCAGGCC GAGCTCGTGG CTCTGCGGGC CGAGAATGCC CAGATCGCGC GCGAGCTCGC CGAGATGAAG GTCTGGGCCC GCAAGGGGGC CGAGGCCTCC ACCGCCACGG CGAAGGACCT GCGCCGGATC GGAACGGTGG GCGTCCGGAT CGACCCGACG GAGGCCGTCT GA
|
Protein sequence | MRRLPMSAVI GALRVNLGLD SAEFQKGLKR AQSSLGAAAK AFGALSAIGA TVGAAMTGIV VPTARAANEI SRLAQVANTT PGTLQRWSAT SKSVGIEQEK LADILKDVND KVGDFLSTGG GEMKDFFEKI APKVGVTAKE FRNLSGPQAL QLYVSSLEKA GVSQAEMTFY MEAIANDATL LLPLLRSNGA EMERLGDQAA DLGAILGDDA VAALRDAHLA LGQMATAVSA ARDRIAAELA PAVQAMAVAF TTSMREGGLL RGVIDGIGSV AGAVADNIDR LAVYTATAAA ALAVSMTPAL IVATRAAWAF VAGLVATRAA LIRTGLGIAV VAVGELAYQV TRTVKAVGGL GNAMEIMGRV ARGVWEGMKT SATALGPALN AVWKTVEAGF LTMIAAVARK WTDFLRDLSQ GMAAVPGMGE AALEVGNMAI LAGSGVHALT SAARGARDEA QALKEEARAL ASEGFDAAAA AAAELRSAVT GTGEAADGAA APVSDLGDNV SDLGAAAGGA KQKLSDLVTA AKAWKERLKT PVQKYREEIA KLGELSKKGL LSADEHRRAI GELNRELGEG IPIIGDVATA WGEFVTGGFK DFKGFVSNVL GSFKSMLAEM IATAARNRIV IGMGLGGGGV AGTAAAAGVP GMGGGGLGML GSLFGGGGGG GVLGIGNAFS AFGSGALGSL GNFFSGGLSG GFAYIGQSLS MATSGLVGFA QAAGAILGPI AAVAAAVSFF GSKTKLLDAG LRVTVRELNA MVETYKKVEK SRFGGLSKSR RTSYGLADGA VASPIVKAVS QMQASVMDVA DTLGIGAEAF KGFAASVKFS TKGLSDEEIG AKLQEKLTEL GDSFAARAFG YVGKNDQAIK DLEKRIAEGT SDAVVSGLKG SIGDRLLSAF FGRKRQGDLA DLIAGNSLVS TRPELAALVK EGESFVEALQ RLSAAMTGVN GVMDTLGMSF RAVDMVTAGM ASDLAALFGG LEGMVSATSS YYQAFYSEAE RMETATRQAT EALAKLGVAL PATRAEYRRL VEAQDLTTER GRELYAALVG MAGVMDQILP SVASLSAELA GLVGTISTDL DGMISGAAEA QRGAAAAAKG WYQVTVALRD YIGDLRSAAS ELISPAVAAA QSQARYQTML ASAMAGDQEA AKAVSGAASA YIEAVRGQAR SAVDVARAQA QVLSDLQLLQ GVTGLEGAKE DVLASLYREQ VDLLTEVRDY LAGGEALKPE QIAALNAQLG SLEGAIAAAK EISYAALRER IDVTVGLMAT ADIPADLRRI LKNATSGVEV SLDMVLRRMD LTPDLVWIAA KASSDHLARI SYLAKTDALP DDLRALAAVR VAQSVRRLAL VMDKPASDLG MAELLKALGA QGGRITLGGS FAFDPSTGFS SWFETTTRGA ITAPMTALRT ALDDLRDAIL AEGRAAGQRE RGAALSAFAG GLATNAAGDI LATDKQILAM AAKAGISTDG KTIGQVMRAI EGFSPLDGIE TIRRLPGSLK DYLWGLFQQR QGRIPLDTAD YLRLYPDVAA DEYGYDPTIH YRNHGREAIL AGLRPFKPEV FDWSAIGLDV PGFAAGGLHA GGLRLVGELG PELEATGPSR IHSAGRTADI LGGAAMGASE VAGAVRDLQA ELVALRAENA QIARELAEMK VWARKGAEAS TATAKDLRRI GTVGVRIDPT EAV
|
| |