| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1903 |
|---|
| Symbol | |
|---|
| ID | 3719190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 500662 |
|---|
| End bp | 501642 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640070062 |
|---|
| Product | putative Flp pilus assembly protein TadC |
|---|
| Protein accession | YP_351952 |
|---|
| Protein GI | 77462448 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2064] Flp pilus assembly protein TadC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0926452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCC TCTCCCTGCT CGAGACCTAC CTGACCGACC GGCTGGGTCC GCTCGGCCCC
CTCATCGCCG TGGGGTCGCT CGGGATCCTG CTCATCGCGC TCACCCTGCC CGTGATGCTG
AAAAAGCGGG TGGAGCCGTT CGACCGGATC CGCGCCCAGC GCACGGCGGC GGTGGCGGCG
CCGGTTCAGA AGGGACAGGC GCTGCGCCGC GCGTCGGGCA GCGAGAAGCT CGACCGGTTC
GCCAATCTCC TGGAGCCCAA GACTGCCGAA GAGATGTCGG CCTCGCGTCT CAAGATGATG
CGCGCCGGCT ACCGCTCGAA GGGCGCCGTG CGCGCGTTCC ACGCGGCCCA GTTCGCGCTG
GGGGTGGGGT TTCTGGCAGC CGGTCTCCTC TATGCGATGG TCGCCTCGGC CGCGGCACCG
CTCACCATGC AGCAGATGGT GCTCTACACG ATCCTGCCCG GGGCCATCGG CTACTACCTC
CCAGTCTACT GGATCAAGCG CCGCGCGCAG GAGCGGTACG ACCAGATCGT GTCGGGCTTT
CCCGATGCGC TCGACATGAT GCTGGTCTGC GTCGAGGCGG GCCAGTCGCT CGATCAGTCG
ATCCTGCGCG TGGCCCGAGA ATCCGCGGCG GGCTATCCGG CGCTTGCCGA AGAGTTCGAG
ATCGTGGCCC ACGAGGTCAA GGCCGGGAAG GAGCGCGTGG CCGTGCTGAA GGACATGTCC
GAGCGCGTGG GCATTCCCGA CGTTTCCTCC TTCGTGACGA CCCTCATCCA GTCGGCCACG
TTCGGCACCT CGATCGCCGA GGCGCTCCGC GTCTACTCCT CCGAAATGCG CGACAAACGT
GTGATGCGGG CAGAGGAGAA GGCAAACACC TTGCCCACGA AGCTGACGCT CGGCACAATG
CTTCTGACCG TGCCGCCGTT GATGCTGATC CTGATCGGCC CCTCGGTCTA TGGCATCGCC
ACTCAGCTGG GCGGACAGTG A
|
|---|
| Protein sequence | MELLSLLETY LTDRLGPLGP LIAVGSLGIL LIALTLPVML KKRVEPFDRI RAQRTAAVAA
PVQKGQALRR ASGSEKLDRF ANLLEPKTAE EMSASRLKMM RAGYRSKGAV RAFHAAQFAL
GVGFLAAGLL YAMVASAAAP LTMQQMVLYT ILPGAIGYYL PVYWIKRRAQ ERYDQIVSGF
PDALDMMLVC VEAGQSLDQS ILRVARESAA GYPALAEEFE IVAHEVKAGK ERVAVLKDMS
ERVGIPDVSS FVTTLIQSAT FGTSIAEALR VYSSEMRDKR VMRAEEKANT LPTKLTLGTM
LLTVPPLMLI LIGPSVYGIA TQLGGQ
|
|---|
| |