| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1778 |
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| Symbol | |
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| ID | 3719004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 362979 |
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| End bp | 364256 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640069936 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_351827 |
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| Protein GI | 77462323 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.128909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGG CGCTCGAAGC CTTCGATCAG CTCGCCACCA CGCAGGGGCT CGAGCCCTTC
GGTCTCTATC ACAAGGCGCT GGCACTGGCC GCCGCGGGCG ATTTCGAGGG CGCGGACGAG
ATCCTGTCGG GGCGCGACGG CAATGCGCTG CGCGTCATGC GCCGCGGCTC GATCGCGCAT
GCCCAGATCC TGAGCCAGCT CGACCGGAAC GCCGATGCGG TGGCGATGCT GGAGAAGAGC
TTCGGCACCG ACGCCGATGC GGGCATCGAC GCGCTGAAGG AACGGCTCGC GGCGGGCGAG
ACGCTGCCCT ATGACGTGGC GCGCAACGCG ACCGACGGCA TGGCCGAGAT CTTCTTTACG
CTCGCGGGCG CGCTGAGTGG CGAGGTCGAC GACGGCTCGA CCCTGCTCTA TGCCCGCACG
GCCACCCATC TGCGCCCCGA CCACACCGAG GCCCTGCTGC TCTCGGCGCA GATCCTCGAC
AATCAGGGCC AGCATCAGCT CGCCTCCGAA ACCTATGCCC GGATCCCGAC CGCGGATCCG
ATGTTCTTCG TGGCCGAGAT CGGGCGCGCC GACGCTTTGC GGGCCGACGG CAAGATCGAG
GCCTCGCTCG AGGTGCTGCA GGGGCTCGCG CGTTCGAAGC CCGAGCTGAT GCAGGTCCAT
CTCGCGCTCG GCGACGCGCT GCGGCGCGAG GAACGCTATG CGGATGCGGT CAAGGCCTAT
GATGCGGCGA TTGCGCGCGT GCCCGCGCCG GAGCGCCAGC ACTGGCCGTT GTTCTACAGC
CGCGGCATCT GTCACGAGCG GCTCTCGCAC TGGAAGGAGG CCGAGGCGGA TTTCCGCCGC
GCGCTCGAGC TCAATCCCGA CGAGCCGCAG GTGCTGAACT ACCTCGGCTA TTCCTTCGTG
GACCGCGGCC AGAATCTCGA GGAGGCGCTC TCGATGATCG AGCGCGCCGT CGCCGCGCGG
CCCGAGAGCG GCTATATCAT CGACAGCCTC GCCTGGGCCT ATTTCCGGCT CGGCCGCTAT
CAGGATGCGG TGGAACCGAT GGAGAAGGCC TCGCTGCTCG AGCCGGTCGA TCCGATCGTC
ACCGACCATC TGGGCGATGT CTATTGGGCC GTGGGCCGCA AGCTCGAAGC CCGTTTCCAG
TGGCACCGCG CCCTGTCCTT CGATCCCGAG GAGAAGGAGG CGCAGCGTAT CCGCCGCAAG
CTCGAGGTCG GCCTCGATGC GCTTCTGGCG GAGGAAGGTG CGAAACCCCT GTCGGTAGCC
GTAAGAGCGA ATGACTGA
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| Protein sequence | MSEALEAFDQ LATTQGLEPF GLYHKALALA AAGDFEGADE ILSGRDGNAL RVMRRGSIAH
AQILSQLDRN ADAVAMLEKS FGTDADAGID ALKERLAAGE TLPYDVARNA TDGMAEIFFT
LAGALSGEVD DGSTLLYART ATHLRPDHTE ALLLSAQILD NQGQHQLASE TYARIPTADP
MFFVAEIGRA DALRADGKIE ASLEVLQGLA RSKPELMQVH LALGDALRRE ERYADAVKAY
DAAIARVPAP ERQHWPLFYS RGICHERLSH WKEAEADFRR ALELNPDEPQ VLNYLGYSFV
DRGQNLEEAL SMIERAVAAR PESGYIIDSL AWAYFRLGRY QDAVEPMEKA SLLEPVDPIV
TDHLGDVYWA VGRKLEARFQ WHRALSFDPE EKEAQRIRRK LEVGLDALLA EEGAKPLSVA
VRAND
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