Gene RSP_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1288 
Symbol 
ID3718202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp3055192 
End bp3055893 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID640072515 
Productbranched chain amino acid ABC transporter ATPase 
Protein accessionYP_354369 
Protein GI77464865 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTC TGGAAGCCCG CGGTCTCGTG CGCCACTTCG GCGGCCTCCG CGCGATCGAC 
GGGGTGGATT TCGACCTCGC CGCGGGAGAG ATCCATGCGC TGATCGGGCC GAACGGCGCG
GGCAAGTCCA CGCTCGTGGG GCTTCTGTCG GGGCGCATCC CGGCGCAGGC GGGCACGATC
CGCTTCGACG GGCGCGACAT CACCCGCCTG CCGGCCCATG CCCGGGTGGG CTGCGGCATC
GCCTATGCCT TCCAGATCAC CTCGGTCTTC CCGAGGCTCA CGACCTTCGA CAATGTGGCG
CTGGCCGTGC AGCGCACCGG CGCGCGGGAT CTGGCCGCCG CGACGGAGGC CGCCCTCGCC
CGCGTGGGGC TTTCGGGCGA GGCGGGGCAG CTTGCGGGCA CGCTCTCCTA CGGCCACCAG
AGGCTGCTCG AGATCGCCAT GGGGCTTGCC CTTGCGCCGC GGCTGCTGAT CCTCGACGAG
CCGACGCAGG GCCTCGCTTC GGGCGAGATC GAGAGCTTCA TGACGCTGGT GCGCAGCCTT
GTGCCCGAGG TGACGGTGCT TCTGATCGAG CACAACATGG AGGTGGTGAT GGATCTCGCC
CAACGCATCA CGGTGCTGAA CGCCGGCCGG GTGCTGGCGC GGGGCACGCC CGCCGAGATC
CAGGCCGACC GCGCGGTGCA GGCCGCCTAT CTCGGAGGCT GA
 
Protein sequence
MSLLEARGLV RHFGGLRAID GVDFDLAAGE IHALIGPNGA GKSTLVGLLS GRIPAQAGTI 
RFDGRDITRL PAHARVGCGI AYAFQITSVF PRLTTFDNVA LAVQRTGARD LAAATEAALA
RVGLSGEAGQ LAGTLSYGHQ RLLEIAMGLA LAPRLLILDE PTQGLASGEI ESFMTLVRSL
VPEVTVLLIE HNMEVVMDLA QRITVLNAGR VLARGTPAEI QADRAVQAAY LGG