Gene RSP_1157 details

Gene Information

• Locus tag: RSP_1157
• Symbol: PSrp1
• ID: 3718073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2919878
• End bp: 2920453
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640072388
• Product: sigma 54 modulation protein / SSU ribosomal protein S30P
• Protein accession: YP_354242
• Protein GI: 77464738
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1544] Ribosome-associated protein Y (PSrp-1)
• TIGRFAM ID: [TIGR00741] ribosomal subunit interface protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.253038
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATACC AGATCAGCGG GAAACAGATC GACATCGGTG AAGCGCTTCA GACTCACGTC 
AAATCCGAAC TTGGCGAGGT GATCGAGAAG TATGCCCAGC GTCCCACCGA GGCGACGATC 
GTCTTTTCGC GCGTTGCGCA TGAACATGTC TGCGAATCCA CGATCCATCT GTCGACGGGT 
CTGACGGCCC AGGCGACCGG CCGTGCGACC GAAATCTACG CCGCCTTCGA GAGCTGCCGC 
GAGAAGATGG ACAAGCAGCT CCGTCGCTAC AAGCGCCGCC TCCGCGACCA TCACCGCGAG 
CGGACGGCCC CGGTTGAATT CGGTCCGGGT TCCTCCTATA TCCTCGCCGC ATCCGAGGAA 
GCCGAGGATG GTGAGGTCGA GAACCTTCAG CCGATGGTGA TCGCCGAGAT GGAGACGAAG 
GTTCCTTCGA TCACCGTCGG CGAGGCCGTC ATGCAGCTGG AACTCGCCGG CCAGAGCATG 
CTTGTCTTCC GCAATGAAGG TCATGGCGGG GTGAACGTCG TTTACCGTCG GGATGACGGG 
AACATCGGCT GGATCGACCC GCGCAACAGC AAATAG 

 

Protein sequence

MRYQISGKQI DIGEALQTHV KSELGEVIEK YAQRPTEATI VFSRVAHEHV CESTIHLSTG 
LTAQATGRAT EIYAAFESCR EKMDKQLRRY KRRLRDHHRE RTAPVEFGPG SSYILAASEE 
AEDGEVENLQ PMVIAEMETK VPSITVGEAV MQLELAGQSM LVFRNEGHGG VNVVYRRDDG 
NIGWIDPRNS K