| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1041 |
|---|
| Symbol | |
|---|
| ID | 3720951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2802063 |
|---|
| End bp | 2803568 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640072270 |
|---|
| Product | malonyl-CoA synthase |
|---|
| Protein accession | YP_354126 |
|---|
| Protein GI | 77464622 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.200492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATC CGTTGTTCGA TGCGCTGTTC GCCCCGCTGG AAGGGCGGGC GAGCGACCTC
ATAATCCTGA AGGACGGCAC GCGGCTGAGC GGCGACGCCT TCTTCCGTCT CCTCGCCCGG
ACGGCCCATG CGCTGCGGGC GGAGGGGCTG CGCCCCGGCG ACCGGATCGC CGTGCAGGTC
GCCAAGAGCC CCGAGGCGCT GGCCGTCTAT GGGGCGGCGG TGGCGCTGGG AGCGGTCTTC
CTGCCGCTGA ACACCGCCTA TACGCCGGCC GAAGTGGACT ATTTCCTGGG CGATGCCACG
CCGCGGATCT TCCTCTGCGA CAGCGCGCAG GCCCCGGCGC TTACGCCGGT GGCCGAGCGG
CACGGGGCGC GGCTCCTGAC GCTCGACGCG GACGGAACGG GCGATCTCGC GCAGAGGACG
AGGGACCGGC CCGAAGAGAT CGGCGCCGAA CCCCGGGACG CCGAGGATCT GGCGGCGCTT
CTCTATACCT CGGGGACCAC GGGCCGCTCG AAGGGCGCGA TGCTGAGCCA GCGCAACCTC
CTGTCGAACG CGGAGGCGCT GGCCGACCTC TGGCGCTTCA CCGAGCGCGA CGTGCTGATC
CATGCGCTGC CGATCTTTCA CACCCACGGC CTCTTCGTCG CCTCGAACGT GACGCTCCTG
ACCCGCGGCT CCATGATCTT CCTGCCCGGC TTCGATCTCG AGGCGATCCT TCGCTGGATG
CCCGCGGCCA CGGCGCTGAT GGGCGTGCCC ACCTTCTACA CGCGGCTCTT GAGCGACCCG
CGCCTGACGC GCGCGCTTGC GGCTGGCATG AGGCTCTTCG TCTCCGGCTC GGCCCCGCTT
CTGGCCGACA CCCATGCCGA GTTCGAGGCC CGCACCGGCC ACCGCATCCT CGAACGCTAC
GGCATGACTG AAACCAACAT GTCCACCTCG AACCCCTACG AGGGCGAGCG GCGGGCGGGC
ACGGTGGGCT TCCCGCTGCC GGGAGTCGAG CTGCGGATCC TCGACCAGGG CCGCGAGGTC
GCGCCCGGCG AGATCGGCGT GATCGAGGTG CGGGGGCCCA ACGTCTTCCA GGGCTACTGG
CAGATGCCCG AGAAGACCGC CGAGGAGCTG CGCCCGGACG GCTTCTTCGT CACGGGCGAT
CTCGGCTGCC GCGATGCCGA GGGCTATGTG CAGATCGTCG GCCGCCAGAA GGACCTCATC
ATCTCGGGCG GCTACAACAT CTACCCCAAG GAGGTGGAGC TTTTGCTCGA CGAACAGCCG
GGCGTGCTGG AAAGCGCGGT GGTGGGGCTG CCCCTTCCCG ATCTGGGCGA GGCGGCGCTG
GCGGTGCTGG TGCCGCGGCC GGGCGTGACG CTGGACCCGC AGGCGGTTCT GGGGGCGATC
GCGGACCGGC TCGCGCGGTT CAAGCAGCCC CGCGCGGCCG TGCTGGTCGA GGAGCTGCCG
CGGAACACGA TGGGCAAGGT GCAGAAGACC CTCCTGCGTG CGCGCTATGC GGGTCTCTTT
GCCTGA
|
|---|
| Protein sequence | MANPLFDALF APLEGRASDL IILKDGTRLS GDAFFRLLAR TAHALRAEGL RPGDRIAVQV
AKSPEALAVY GAAVALGAVF LPLNTAYTPA EVDYFLGDAT PRIFLCDSAQ APALTPVAER
HGARLLTLDA DGTGDLAQRT RDRPEEIGAE PRDAEDLAAL LYTSGTTGRS KGAMLSQRNL
LSNAEALADL WRFTERDVLI HALPIFHTHG LFVASNVTLL TRGSMIFLPG FDLEAILRWM
PAATALMGVP TFYTRLLSDP RLTRALAAGM RLFVSGSAPL LADTHAEFEA RTGHRILERY
GMTETNMSTS NPYEGERRAG TVGFPLPGVE LRILDQGREV APGEIGVIEV RGPNVFQGYW
QMPEKTAEEL RPDGFFVTGD LGCRDAEGYV QIVGRQKDLI ISGGYNIYPK EVELLLDEQP
GVLESAVVGL PLPDLGEAAL AVLVPRPGVT LDPQAVLGAI ADRLARFKQP RAAVLVEELP
RNTMGKVQKT LLRARYAGLF A
|
|---|
| |