| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0863 |
|---|
| Symbol | leuC |
|---|
| ID | 3718217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2613996 |
|---|
| End bp | 2615423 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640072089 |
|---|
| Product | isopropylmalate isomerase large subunit |
|---|
| Protein accession | YP_353947 |
|---|
| Protein GI | 77464443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
|---|
| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTC CGAGAACGCT CTATGACAAG ATCTGGGACG ACCATGTCGT CCACCAGTCC
GAAGACGGCA CCTGCCTGCT CTACATCGAC CGCCATCTCG TCCACGAGGT GACGAGCCCG
CAGGCCTTCG AAGGCCTGCG CATGACGGGC CGCAAGGTGC GCGCCCCCGA GAAGACCATC
GCCGTGCCGG ACCACAACGT CCCCACGACG GAAGGCCGCG ACACGAAGAT CGACAACGAG
GAGTCGCGCA TCCAGGTCGA GGCGCTCGAC AAGAATGCCC GCGACTTCGG GATCAACTAC
TATCCCGTGT CGGACATCCG GCAGGGGATC GTCCATATCG TCGGGCCCGA GCAGGGCTGG
ACGCTGCCGG GCATGACGGT GGTCTGCGGC GACAGCCACA CGGCCACCCA CGGCGCCTTC
GGCGCGCTGG CCCACGGCAT CGGCACCTCC GAGGTCGAGC ATGTGCTGGC CACGCAGACG
CTGATCCAGA AGAAATCGAA GAACATGAAG GTGGAGATCA CCGGGAGCCT GCGCCCCGGT
GTCACCGCCA AGGACATCAC GCTGTCGGTC ATCGGCCTCA CCGGCACCGC GGGCGGCACC
GGCTATGTCA TCGAATATTG CGGGCAGGCG ATCCGCGAAC TGTCGATGGA AGGCCGGATG
ACCGTCTGCA ACATGGCGAT CGAGGGCGGC GCGCGCGCGG GCCTGATCGC GCCGGACGAG
AAGACCTTCG CCTATGTGAT GGGCCGTCCA CATGCGCCGA AGGGCGCAGC CTGGGAGGCG
GCGCTCGCCT ACTGGAAGAC GCTCTTCACC GATGAGGGCG CGCAGTTCGA CAAGGTCGTG
ACGATCCGCG GCGAGGACAT CGCCCCGGTC GTGACCTGGG GCACCTCGCC CGAGGATGTG
CTGCCGATCA CCGCGACCGT CCCCGCCCCG GAGGATTTCA CCGGCGGCAA GGTCGAGGCC
GCACGCCGCA GCCTCGAATA CATGGGCCTG ACCCCGGGCC AGAAGCTGAC CGACATCAAG
ATCGACACGG TCTTCATCGG CTCCTGCACC AATGGCCGGA TCGAGGATCT GCGGGCCGCG
GCCGAGATCC TGAAGGGCAA GAAGGTGGCG CCGGGAATGC GGGCCATGGT CGTGCCGGGC
TCGGGCCTCG TGCGCGCGCA GGCCGAGGAA GAGGGGCTGG CGCAGATCTT CATCGACGCG
GGCTTCGAAT GGCGCCTCGC GGGCTGCTCG ATGTGCCTCG CGATGAACCC CGACCAGCTC
TCCCCGGGGG AACGCTGCGC CTCGACCTCG AACCGGAACT TCGAGGGCCG TCAGGGCCGC
AACGGCCGCA CCCATCTCGT CAGCCCCGGA ATGGCCGCCG CTGCGGCGAT CACCGGTCAC
CTGACCGACG TGCGCGACCT GATGATGGCG CCGGCCGAGC CGGCGTGA
|
|---|
| Protein sequence | MTAPRTLYDK IWDDHVVHQS EDGTCLLYID RHLVHEVTSP QAFEGLRMTG RKVRAPEKTI
AVPDHNVPTT EGRDTKIDNE ESRIQVEALD KNARDFGINY YPVSDIRQGI VHIVGPEQGW
TLPGMTVVCG DSHTATHGAF GALAHGIGTS EVEHVLATQT LIQKKSKNMK VEITGSLRPG
VTAKDITLSV IGLTGTAGGT GYVIEYCGQA IRELSMEGRM TVCNMAIEGG ARAGLIAPDE
KTFAYVMGRP HAPKGAAWEA ALAYWKTLFT DEGAQFDKVV TIRGEDIAPV VTWGTSPEDV
LPITATVPAP EDFTGGKVEA ARRSLEYMGL TPGQKLTDIK IDTVFIGSCT NGRIEDLRAA
AEILKGKKVA PGMRAMVVPG SGLVRAQAEE EGLAQIFIDA GFEWRLAGCS MCLAMNPDQL
SPGERCASTS NRNFEGRQGR NGRTHLVSPG MAAAAAITGH LTDVRDLMMA PAEPA
|
|---|
| |