13 homologs were found in PanDaTox collection
for query gene RSP_0504 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007493  RSP_0504  HupK  100 
 
 		 270 aa  508  1e-143  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_009049  Rsph17029_2155  HupK  94.44 
 
 		 270 aa  485  1e-136  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.127907 
 
 
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NC_009429  Rsph17025_3367  rubredoxin-type Fe(Cys)4 protein  61.11 
 
 		 270 aa  312  4.999999999999999e-84  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.391965 
 
 
-
 
NC_008687  Pden_3106  HupK  38.54 
 
 		 300 aa  132  6e-30  Paracoccus denitrificans PD1222  Bacteria  normal  0.628354  normal  1 
 
 
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NC_009720  Xaut_2181  putative hydrogenase expression/formation protein HupK  33.55 
 
 		 329 aa  84.7  0.000000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.124929  normal  0.212664 
 
 
-
 
NC_010581  Bind_1158  putative hydrogenase expression/formation protein HupK  33.09 
 
 		 329 aa  54.7  0.000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.846378  normal  1 
 
 
-
 
NC_011094  SeSA_A1636  putative dehydrogenase protein  28.12 
 
 		 295 aa  49.3  0.00006  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_1287  hypothetical protein  40 
 
 		 384 aa  44.7  0.001  Cupriavidus metallidurans CH34  Bacteria  normal  0.272363  normal  0.489405 
 
 
-
 
NC_008576  Mmc1_2497  Ni,Fe-hydrogenase I large subunit  26.96 
 
 		 379 aa  45.4  0.001  Magnetococcus sp. MC-1  Bacteria  normal  0.633578  normal  0.13514 
 
 
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NC_011083  SeHA_C1703  putative ATP/GTP-binding protein  28.82 
 
 		 295 aa  44.7  0.001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.746184  normal  1 
 
 
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NC_011205  SeD_A1804  putative dehydrogenase protein  27.87 
 
 		 295 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0688891  normal  1 
 
 
-
 
NC_011149  SeAg_B1639  putative dehydrogenase protein  27.53 
 
 		 295 aa  43.1  0.005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0272996  n/a   
 
 
-
 
NC_011080  SNSL254_A1644  putative dehydrogenase protein  27.18 
 
 		 295 aa  42  0.01  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.489945  normal  1 
 
 
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