Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0495 |
Symbol | hupS |
ID | 3718446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 2231581 |
End bp | 2232690 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640071703 |
Product | hydrogenase protein small subunit |
Protein accession | YP_353567 |
Protein GI | 77464063 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCCAGA TCGAAACCTT CTACGATGTG ATGCGCCGCC AGGGGATCAC CCGGCGCAGC TTCATGAAAT ACTGCTCGCT CACGGCGGCG GCGCTGGGGC TCGGCCCCTC CTTCGTGCCG AAGATCGCGC ACGCGATGGA GACGAAGCCG CGCACACCGG TGATCTGGGT CCATGGGCTC GAATGCACCT GCTGCTCGGA GAGCTTCATC CGCGCGGCCC ATCCGCTGGC CAAGGACGTC GTCCTGTCGA TGATCTCGCT CGACTATGAC GACACGCTGA TGGCGGCGGC GGGCCATCAG GCCGAAGCCG CGCTGATGGA CACGATCGAG AAATACAAGG GCAACTACAT CCTTGCCGTC GAGGGCAACC CGCCGCTGAA CGAGGACGGG ATGTATTGCA TCATCGGCGG CAAGCCCTTC GTCGAGCAGC TGAAGATGGC GGCCGAACAT GCCAAGGCGA TCATCAGCTG GGGGGCCTGC GCCTCCTACG GCTGCGTGCA GGCGGCCGCC CCCAACCCCA CGCGGGCCAC GCCCGTGCAC AAGGTCATCC TCGACAAGCC GATCGTCAAG GTGCCGGGCT GCCCGCCCAT CGCCGAAGTC ATGACCGGCG TCATCACCTA CATGCTGACC TTCGACCGGC TGCCCGAGCT CGACCGTCAG GGCCGCCCGG CGATGTTCTA CAGCCAGCGC ATCCACGACA AATGCTACCG CCGCCCGCAT TTCGACGCGG GCCAGTTCGT CGAGGCCTGG GACGACGACT ACGCCAAGAA GGGCTACTGC CTCTACAAGA TGGGCTGCAA GGGGCCGACC ACCTACAACG CCTGCTCGAC CGTGCGCTGG AACGAGGGCG TGAGCTTCCC GATCCAGTCC GGCCACGGCT GCATCGGCTG CTCGGAGGAC GGCTTCTGGG ATCAGGGATC CTTCTACGAC CGGCTGACCA CCATCAAGCA GTTCGGCGTC GAGGCCAATG CCGACACGAT CGGCCTCACG GCCGTGGGCG CGCTCGGCGC GGGCGTGGCG GCCCATATCG CGGCCACCGC CCTCAAGAGC GCGCAGAAGA AATCGCAGGC GGCCAATACC GCGAAGACAG ACGAAAAGAC GGAGGCCTGA
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Protein sequence | MPQIETFYDV MRRQGITRRS FMKYCSLTAA ALGLGPSFVP KIAHAMETKP RTPVIWVHGL ECTCCSESFI RAAHPLAKDV VLSMISLDYD DTLMAAAGHQ AEAALMDTIE KYKGNYILAV EGNPPLNEDG MYCIIGGKPF VEQLKMAAEH AKAIISWGAC ASYGCVQAAA PNPTRATPVH KVILDKPIVK VPGCPPIAEV MTGVITYMLT FDRLPELDRQ GRPAMFYSQR IHDKCYRRPH FDAGQFVEAW DDDYAKKGYC LYKMGCKGPT TYNACSTVRW NEGVSFPIQS GHGCIGCSED GFWDQGSFYD RLTTIKQFGV EANADTIGLT AVGALGAGVA AHIAATALKS AQKKSQAANT AKTDEKTEA
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