| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0492 |
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| Symbol | hupU |
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| ID | 3718443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2226442 |
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| End bp | 2227434 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640071700 |
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| Product | hydrogenase small subunit |
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| Protein accession | YP_353564 |
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| Protein GI | 77464060 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.58505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC TCTGGCTTCA GGCCTCGGGC TGCGGCGGCT GCACCATGTC GCTCCTCTGC
GCCGAGGCGC CGGGCCTCTT CGACCTTCTC GAGGATGCGG GCCTGTGCTT CCTGTGGCAC
CCCTCGCTTT CGGTCGAGTC CGGGGCGGAG GTGCGGGCGC TCCTCGACCG GATCGAGGCG
GGAGCGCAGC CGCTCGACAT CCTCTGCGTC GAGGGCGCCA TCGCGCGCGG GCCCCGCGGC
ACCGGACGGT TCCAGATGCT CGCGGGCACC GGGCGCTCGA TGCTCGAGAC CGTCACGCGG
CTCGCGCCCC TTGCCCGGCA TGTGGTGGCG GTGGGCAGTT GCGCGGCCTT CGGCGGGATG
ACGAGCGCGG GCGGCAACCC CTCGGACGCG ACGGGGCTCC AGTACGAGGG TACCCACGAG
GGCGGCATCC TTCCGCCCGA GTTCCGGGCG CGGGACGGCC TGCCCGTGGT GAATGTCGCG
GGCTGCCCGA CCCATCCGGG CTGGGTGACC GAGACGCTGA TGCTGCTAGG CGGCAGCGCA
CTGGCGGCCG GCGATCTCGA CCGGTTCGGC CGCCCACGCT TCTACGCCGA TCATCTCGTG
CATCACGGCT GCTCGCGCAA CGAATATTAC GAATACAAGG CCAGCGCCCG CACCCCCGGC
GAGATCGGCT GCATGATGGA ACATATGGGC TGCATCGGCA CGCAGGCGGT GGGCGACTGC
AACATCCGGC CCTGGAACGG CAGCGGCTCC TGCACCTCGG GCGGCTATGC CTGCATCGCC
TGCACCGCGC CCGAATTCGA GGAGCCGCGC CACCCCTACT CCGAGACGCC CAAGATCGGC
GGCATCCCGG TGGGCCTGCC CTCGGACATG CCGAAGGCCT GGTTCATGGC GCTGGCGAGC
CTGTCCAAGG CCGCCACGCC CGAGCGCATA CGGCGGAACG CGGCCTCCGA CCGGATCGAG
GTGCCCCCCA CGCTCCGGAT GCCGAAGCGA TGA
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| Protein sequence | MNILWLQASG CGGCTMSLLC AEAPGLFDLL EDAGLCFLWH PSLSVESGAE VRALLDRIEA
GAQPLDILCV EGAIARGPRG TGRFQMLAGT GRSMLETVTR LAPLARHVVA VGSCAAFGGM
TSAGGNPSDA TGLQYEGTHE GGILPPEFRA RDGLPVVNVA GCPTHPGWVT ETLMLLGGSA
LAAGDLDRFG RPRFYADHLV HHGCSRNEYY EYKASARTPG EIGCMMEHMG CIGTQAVGDC
NIRPWNGSGS CTSGGYACIA CTAPEFEEPR HPYSETPKIG GIPVGLPSDM PKAWFMALAS
LSKAATPERI RRNAASDRIE VPPTLRMPKR
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