| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05479 |
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| Symbol | RSp0296 |
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| ID | 1222428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 386772 |
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| End bp | 393788 |
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| Gene Length | 7017 bp |
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| Protein Length | 2338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240156 |
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| Product | hypothetical protein |
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| Protein accession | NP_521857 |
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| Protein GI | 17548517 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0543187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA ATCGCACCCA CCGCAACCTC CCTCCCGCTC ATGTCGGTCA CACGACAAGG
GGCCATGCCC CGGCTCCGGC CGGACCGCAG CGTTCGCGCG CGCCGCGTGC CCGACCGCAG
GACCTGCCGG GTTCGTCCAG GGGCGCGGCG CGGACGGCTC GGATACCGTC TTCGGCGCCC
GGCGAAGCGC TGTCGAGATC GCTGAACTAT TGTGAATACA ACCTTGCCGG CGAGCGACGC
ACGAGACTCG AAAACGAGCG CAGCCAGCAG CAAAACGAGC TCGGGCACAA GAGCGGCATC
GACTTTCCGG CGCGATGCAT CGACATGGCC CGCAACAATG TCCTGGCCGA AAGCAACGGC
CATGGATGGG CGCTGGTATT CCTCTTTCCG GGAGGCGACA GCGACACGAA CCTCACCCTG
CTGGGCGACT ATCTCGCCAA ACTGGGCGAT TGCGAACATG GCCGGGTCGA ACCGGCCCTG
AGCGGCAGGA TTCGTGCATG CGCCGAACTG TGTGCGCATT ACCTGCTGCA CACCTCGTGG
TTCGAAGGTG CGCCCGCTGC CTCGTATGCG TATCCGGCGA GCAAGTTCAG CAAGTTCCCG
GACAGCCGCC CCTGCATGGA GGCGCTGGAC TGGATCGCCA GGCAGGCCTT GCAGGCGCGG
AACCTGCAAC CGATGGGCGA CAGAAAGGCC TCGCAGTTCG TGAGCGGACT CGCGAAGAAC
ACGCGAAGCG ACGCATGCAG AGACGCCGTG CAGCGCATTG TCCATTGGCT GCTCGAAAAC
AGCGCGGTGC GCGCCCGGCT GGATGCCATT CAGGTTCCCA CGCTGCTGAA CGCCCTGAGC
AAATGGGCGA CCCATGACGG CGCGACGTCC CTCGCATTGC AGGTGGCCGA TCTGCTGGCG
TCGAAACCTC GGTTGCGCGA AGCGCTGGAC AGGCAAGGCA TCGGCAATTG CCTCAACGCG
CTGAGCAAGT GGTCGACCGA ACCGTGGGCG GAGAACGTGG TCATGCAGCT GGCCGGCCGC
TTGACGGCGG AGCCCGACCT GCGGCTTTCG CTGCGGGGGC AGGAACTGGT CAATTCGCTG
AATGCATTGA GCAAATGGGC GCACTGCGAA CCGGCAAAGC AGGCGATCCT GCAACTGGCA
GACCGCCTGG CGACCGAGCC GCAACTGCGT CGCCAGCTCA ATGCGTCGCT GCTGTCCAGC
GGGCTGAACG CGCTGAGCAA GCTGTCCGGC GAGCGCCAGG CGAAGGAAGC CGCCCTGCAG
CTGGCGCACA GCATCGCAAT CGAACCCCGC TTGCTGCAAA AGATCGACGC GCAGGCTGTT
GCCAACGCAC TCAATGCGCT GAGCAAGTGG CCCGCGGACG AGCGGGCGAT CCGGGCGGCA
CGCCTGCTGG CGGACTGCCT GGTCTCAAAC CCGGGGCTGC GGCGCGCACT GAAGCCGCAG
GAGTTCACCA GTACGCTGAA TGCGCTGAGC AAATGGCAGC ACGAAGACAC GATCAAGCAG
GCGGCCCTGC TGCTCGCCGA GCGCATCACG ACAGAGCCCG CGCTGCGCGC GGCGATGCGG
GAGCGGGACA TCGCCAACGC GATGAACGCG CTCTGCAAAT GGCCGGGCGC CGACGTGTCG
AAACAGGCGG TGCTGCTGCT GGCCAAGCGG CTCGAAGCGG AACCGCAGCT GCGCAACGCG
ATGAATGACC AGCACGTTTC CAACACCCTG GGCGCACTGA GCAAGTGGCC CGACGAAGAA
CAGGCGAGCC GGACGGCGCT GCTGCTGGTC AAGCGCCTGG TTGACGAGCC CCGCCTGCGG
CAGTCACTGG AGGCGCAGGG CGTCGCCAAC ATCCTGAACG CGCTGAGCAA GTGGCCGCAG
CACGACCTGG CAAAGCAAGG CGCCCTGCTG CTGGCCGACC GCGTCGCGTC CGAGCCGAGC
CTGCTGACGG CCATGGACAC ACAGGAGACG ATCAACACAC TGAGCGCGCT GAGCAAATGG
CCCGGCGAGC CGCGGGCCAC GCTCGCCGCG CAGCGGCTGA CGGCGGCGTC CACCGGACGA
TGGGCCACCC TGGACGCGCG CAACCTCTCC AATGCGCTGA TCGCACTGAG CCGGTGGCCC
GATGAAAGCT GGGCCAGGCA GGCCGCCATG CCACTGGCCG AACGCATTGC CACGGAACCG
CTGGCGTGGA ACAGCGCGGA TCCGCAAAGC GTGAGCAACG CCCTGAGCGC GCTCTCGAAG
TGGCCCGACG AAAACCAGAC GCGGCTCGCC ACCCGCGAAC TCGCCGGCCG GATCCTCGCG
GACGAGAAGC TGCGGATGGC GTTCGATGCG CAAGCGCTGG CGCACAGCCT GAACGCGCTG
GCGAAATGGC CGAACGAGCC GGAAGCCATG CGGGCACTCT GGCAGCTGTC CACCCTGCCG
GGGCGAGCCA GCCATCCGTG GCGCACCTTC AACCTCGTGG ATATGGCGCA GATCAGCAAC
GCATTCGCGC GCCTGCTCCA GGACGACGGA GAGGACCTCG AGCGGGCCCG GGGTATCCTC
CAGCACCTCG CCGTCCATCT CGAGCTGCAC CCCGAATGCT TCGAGCGCTC CAGCGTCGGC
CATATCGGTG TGCTGTTCAA GTCGTTCGCC AATCTGAGGA TCTTGCCGTC GCTGCGTCCG
CTGAGCAGGC CGGTGCTGAA CCGGGTGATG ACGCTGTGCC GCGAGACGCA GTTGCGCGAC
GAACCGCTCG AGACCATCGG CAATCTGTGC CTCGGACTGC TGCCGCTGGC CCGCAGCCCT
GAGCTCGTCC GGCATCGCGC CTCGGCATTG CGGGCCTTCG ATGCCCTGCA GCCCATCGTG
GCGCGCAAGA TCGACAGCTA TCTTCGGCAA GGCGAGCGTG CGACAACCGG AGCCGCCCTG
CTCGTGACGG ATGGGCAGGA AGCCTGCGGC ACGCGCGGCC CGGCCCTGAC CTTCTATCAG
ATCCTCAAGG CCTACACGCT CGTCGCCCGC CAATGGAAGC GGCGCTATAT CCAGGATGCG
CGCCAGACGG TCCACGACCG GCAAGCCGCC CTCCAGCAAT GGGTCAACGA CACGCTGGCG
CGCACGCGGA GCGTGATCGA AGCCGATCTG CAGGAAAAGA GCTGGAACCT CATCGCCCAG
ATCGAGGCGG GCGACGACGT GCTCAATGCA TTGGACCTGC GCATCGGCAA GGACCTGGAG
CACATCACGC AGCGCCATCC GCCGACCCGC TTCGACCTGG CCGGCGCGCA CACGCGCATG
GGCACTGCGC CGGGGAGGGT CAGGCCCGTC ACGGCAGGCG TGGGCGATAC CCGCCATGTC
ACGGTCGACC TGCAGGGGCG CGAACTCAAG GTAGACGACG GGATCCATCC GCCCTATTCG
CTCTATGCCC GCCTGACCGG ACAGCCGCTG GTCGAAGTCC GGCTGCCGGG CAAGCTGAGC
ACCTTCATGC TGGCGCGCAC CTTCCAGTAC CAGGGCGAGC CCTGGCGCTT CGACCTGTTC
GGCGGCAGCC GGCTCACGCG CGGTCGCAGC AACCGGGTGG TCTCCATCCT GGCGGGCGAT
CGCCCGCTCC CCTCCGTGCT GCCGGCCATA CGGTATGCCG ACAGCGCGCC GGGCAGCGCA
TTCATGGCCT TGACGCACAA GCTGGCCCCT CAGCGCGAGG ACTGGTCGCG CATGCAGCGC
GCGCTGCTGG AAATGGTGCC CCACGATCAT GTCGTGGAAG GCACGATGCG AATCGGCTGG
TTCAAGGACG TCTCCGGCCC GCAGCATCCG TTCAAGCTCA CCGGCCCCGG CGGCCAGCGC
ATCGCGCTGT GCCCCAACGA CGGCTGCGGC TTCCTGAAAT GGGAGGTGGC CATGCAGATT
CCCGCCGTGC GCGAGCAGAT CGAGGCCTGG CACGCGGTGC GCAGAGGAAG GGCCACGGAC
GCCCAGCAGC AGCGCATTGC CGATCAGGCG CCGGGTTTCA ACACGATGCC GCCGCAAGCG
CTGATGCATT TCCCGCGTGA CGAGGCGGTG CTGGTGGAGG CCCACGAAGC GCTGCAGCAC
AGGCTGGACA AGCTGCGCGC CGAAGTCCAG GGCCGCGGCG CCCCCGCTTC GAAGCTGGAG
GCAGAGGCCG GCGCGCTTTC GCCGGACGCG GTGGACCTCC TGACGCTGTA CCAGATGGCC
ACCAGCGGCG GCTACCAGGG ACGGCGGATC CGTGCGGTGC CATCAGCCGA CGACAAGCTG
TATCTGCCGA CCATCCCGAT GAACGGCTTC GCGCGCCCGG CGGGCGACCT GCTGGTCGGC
AAGCCCCCCT ACGACAAGGA GAACCTGCTG CCGATCGGCC CCGAACGGGT GGGCACGGCC
GTGCACGGCG ACGCAACCGG CCGCTTCCTT GACCAGTGCT TCGCCATCCA GTACAGCTAC
ACCGGCTTTG ACGACGGCTC CGGCCTGGCC GCCGACATGC TGCACAGCAA GGGCATGCTG
ATCATCCCGC CGCTGGGGTA CTGGTCGGCC GCGCACGGGC ACATGGACCT CGCCTGCTCC
ACGGAAGACC TCAAGGTGCT GTCGCGCTGG AAGCAGGGGC GCGACCGCGA CAGTGTGCCG
GCGAGGATGC TCAGCACCGG CAGCCTGCGC GTCAAGGACA TCCTGCTGCC TGGCCGCCTC
GGCGCGCTGC CGATTCCGGA ACTGCGCAAG CGCAACATGG ATACGGACGG CGACGATGCG
TTCGTCTATG CCGGCTATCC CAAGCTGGCG GCGCACATCC GGCGCGTCAT GGACGACCGC
AGCGACCGGC GCGGAACCGA ACACTCATTC AAGCCGCCGA AAACCGCGAA CCCGGCGTTC
GACTCGCAGG GCCAATACCA GGCCGGGCGC GCCCGCGAGA TCCTCGCGGA GCAGCGTGGC
GGCCAACTGG TCGGTGTGGC CAGCAATGCC GCCACGCGCT TCCTGTCGCA GCCGGACGAA
CTGCGCGAGG CGATGGCGAC GAGCATGATG TTCGGCACCT ACGACGGCAT CGAGCGGCGC
CTGCGCAATG GGCTGCGTGC GCTGCTCGAG GGCCGCGAGC CGGCCCCGGC ACTGCAGGAG
CTGCAGGCGC TCGCACACCA GGCCATCGCC CGTGCGCATC TGCCCGAAGC CCACGCGGTT
GCGGTGCTGC TGCACACGCT GACGACCCAG CTGGGGGCGG CCGAAGCCCA ACCGGTGCCT
CAGCTCGCCG CGGACGTGAC GCAGCGGTTC AGCCCGCTCG CCGAGGCCTG GTCGGCGGCG
GCGGACACGC CTGCGCGCAT CCATGCGATC CTGGATCACT ACCCGGTGTG CCGCCTGTCG
CACGAGCAGT TTCCCAAGGG CCAGCCCGGA TACGTGAAGG GCCAGCCGGA ACTGACGATG
CGCAACCTCT TCACCCTGGC GGTGAAGGTC GGCACCGATG CGCTGAAATC GGATACCGGC
ACGGAACTGT TCACGACACT GATCCAGAAG TGCGAGGCCG TCGAACGGTC GTTTCCCGGC
CGGGTGCGGT ACGTGCCGCA TACCAAGCAG ACCGCGCGCG AGTTTCGCAA CGAGCGCTTC
GATCCAGAAC GGGCCGTGGC GACGCTGGAG CGCATTCCCA CCCTCGCGGC GGGGGTCATG
CAGGATGCCG TCAGCTCGCT TCAGCAGGCG GGCCTGCTGG TCGCGCGGCC CGCGCCGGCG
GAGCGGCTGC GAACGGTGTC GCCCGAGGCG ATGGATCGCG CAGCCATAGT GCTCAACGAG
CGGGCGCACA CGGCCTCGGC GCAGATCACG CCACTGCTGC AGACGAACCT GCGCGCGTGG
ATCGGGGCCG ACCTAGGCGC CGACGCCGCG CGCCTTGCCG GACTCGAACA CGCCGTCAAA
TCGGCGGGCT CGCTGAAGGA CAAGCTGGGC TACATGATCG CCGCGAAGCA GTTGCCGGAT
CTGCAGGACG CCCTCTCGCG GGTCAACGAT GCGCTGCGCT ACAGCATCGT GCTGCCGCCG
GACACATTCG TGGCGGCGTC TCGCCGCATC CTCGCGGGCC TGGAAAAGCA TGGGCATGCG
ATGACCGCGC GAACCAACCA TTTCAGCCAA CCGGGCACCG CGTTCGGGGC GCTGAGCGTG
ACCCTGCAGG CCCCGAGCGG CGACTTCCTG TGGGAGATCC AGTTCCACAC GGAGCAGACC
TTCGAATTGA AGGCGCGCCA CCACAACCTG TACAAGCAGG CGCAGCAAGA GCGGCATCAG
GGCGCATCGT CCGACGCCAT CCGCGCGCTG CTTCGGCCGG CGTGGCAAGA CTTCCGGGCG
GTGCCCGTGC CGGCCGGATG CGAGGAGATC GACGACTGGC AGCAGGAGTC GGTCGATACA
GCGCCACCGT CCCATCCGGT GCGCGAAGTG CAGAGTGCGC AGCCGATCGC AGCCTATCTG
CGGCCGCTGG TGCGCGAGCT CGGCACGCAA GCCCACCGCA TGGAAGCGCG GGTCTCGCCG
AAGCTGCAGC CGCTGGTGCA GAAGCATGGC GGGAAGCTGC GCGAAGACAA GCCGGGCAAC
TGGCGCCAGT TCATCTTCAA GAAAGAGCGC TCCATCGCGC GCAAGATCGC GCTGCGCCAG
CGCGCCAACG AACACCTGAC GCCGGAGCAC GCCGCTGCGC GGGTCCGGGA TACCCTGCGG
TACGAAGTCA TCCTGCCCGC CGAAGGATTC GGCAAGGCCG TCGACACGAT CCTCAAAACG
CTCGGCAGGC ATGGCCTGAA AGCGATGCGC CTGAAAAACG CGTTCATGCG GCCCGACACG
ACCTACGCCG GCCTCAATGT CAACTTGCGC CTTGCCGACG CCAGCGCCCC CGGAGACTTC
GAGATCCAGT TCCATACGGC CCACAGCCTG AGCACCAAGC TCAAGATGCA CAGGGATTAC
GAGAAAGTCC GGGAATTGCC GCCCGCCGAC GCGCGCATCG ACGGCGACGA AGCCGGCCTT
GACTTCAACG CTGAACGCGA GCGGCGCCTG AAGAAAATGC GTGACGCGGC AGCCCTGGTC
GAGCGCCCGC AAGGTATCGA AACCCTGATC CCGTTCGACC TCTACCAGGA TGCGTAG
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| Protein sequence | MKFNRTHRNL PPAHVGHTTR GHAPAPAGPQ RSRAPRARPQ DLPGSSRGAA RTARIPSSAP
GEALSRSLNY CEYNLAGERR TRLENERSQQ QNELGHKSGI DFPARCIDMA RNNVLAESNG
HGWALVFLFP GGDSDTNLTL LGDYLAKLGD CEHGRVEPAL SGRIRACAEL CAHYLLHTSW
FEGAPAASYA YPASKFSKFP DSRPCMEALD WIARQALQAR NLQPMGDRKA SQFVSGLAKN
TRSDACRDAV QRIVHWLLEN SAVRARLDAI QVPTLLNALS KWATHDGATS LALQVADLLA
SKPRLREALD RQGIGNCLNA LSKWSTEPWA ENVVMQLAGR LTAEPDLRLS LRGQELVNSL
NALSKWAHCE PAKQAILQLA DRLATEPQLR RQLNASLLSS GLNALSKLSG ERQAKEAALQ
LAHSIAIEPR LLQKIDAQAV ANALNALSKW PADERAIRAA RLLADCLVSN PGLRRALKPQ
EFTSTLNALS KWQHEDTIKQ AALLLAERIT TEPALRAAMR ERDIANAMNA LCKWPGADVS
KQAVLLLAKR LEAEPQLRNA MNDQHVSNTL GALSKWPDEE QASRTALLLV KRLVDEPRLR
QSLEAQGVAN ILNALSKWPQ HDLAKQGALL LADRVASEPS LLTAMDTQET INTLSALSKW
PGEPRATLAA QRLTAASTGR WATLDARNLS NALIALSRWP DESWARQAAM PLAERIATEP
LAWNSADPQS VSNALSALSK WPDENQTRLA TRELAGRILA DEKLRMAFDA QALAHSLNAL
AKWPNEPEAM RALWQLSTLP GRASHPWRTF NLVDMAQISN AFARLLQDDG EDLERARGIL
QHLAVHLELH PECFERSSVG HIGVLFKSFA NLRILPSLRP LSRPVLNRVM TLCRETQLRD
EPLETIGNLC LGLLPLARSP ELVRHRASAL RAFDALQPIV ARKIDSYLRQ GERATTGAAL
LVTDGQEACG TRGPALTFYQ ILKAYTLVAR QWKRRYIQDA RQTVHDRQAA LQQWVNDTLA
RTRSVIEADL QEKSWNLIAQ IEAGDDVLNA LDLRIGKDLE HITQRHPPTR FDLAGAHTRM
GTAPGRVRPV TAGVGDTRHV TVDLQGRELK VDDGIHPPYS LYARLTGQPL VEVRLPGKLS
TFMLARTFQY QGEPWRFDLF GGSRLTRGRS NRVVSILAGD RPLPSVLPAI RYADSAPGSA
FMALTHKLAP QREDWSRMQR ALLEMVPHDH VVEGTMRIGW FKDVSGPQHP FKLTGPGGQR
IALCPNDGCG FLKWEVAMQI PAVREQIEAW HAVRRGRATD AQQQRIADQA PGFNTMPPQA
LMHFPRDEAV LVEAHEALQH RLDKLRAEVQ GRGAPASKLE AEAGALSPDA VDLLTLYQMA
TSGGYQGRRI RAVPSADDKL YLPTIPMNGF ARPAGDLLVG KPPYDKENLL PIGPERVGTA
VHGDATGRFL DQCFAIQYSY TGFDDGSGLA ADMLHSKGML IIPPLGYWSA AHGHMDLACS
TEDLKVLSRW KQGRDRDSVP ARMLSTGSLR VKDILLPGRL GALPIPELRK RNMDTDGDDA
FVYAGYPKLA AHIRRVMDDR SDRRGTEHSF KPPKTANPAF DSQGQYQAGR AREILAEQRG
GQLVGVASNA ATRFLSQPDE LREAMATSMM FGTYDGIERR LRNGLRALLE GREPAPALQE
LQALAHQAIA RAHLPEAHAV AVLLHTLTTQ LGAAEAQPVP QLAADVTQRF SPLAEAWSAA
ADTPARIHAI LDHYPVCRLS HEQFPKGQPG YVKGQPELTM RNLFTLAVKV GTDALKSDTG
TELFTTLIQK CEAVERSFPG RVRYVPHTKQ TAREFRNERF DPERAVATLE RIPTLAAGVM
QDAVSSLQQA GLLVARPAPA ERLRTVSPEA MDRAAIVLNE RAHTASAQIT PLLQTNLRAW
IGADLGADAA RLAGLEHAVK SAGSLKDKLG YMIAAKQLPD LQDALSRVND ALRYSIVLPP
DTFVAASRRI LAGLEKHGHA MTARTNHFSQ PGTAFGALSV TLQAPSGDFL WEIQFHTEQT
FELKARHHNL YKQAQQERHQ GASSDAIRAL LRPAWQDFRA VPVPAGCEEI DDWQQESVDT
APPSHPVREV QSAQPIAAYL RPLVRELGTQ AHRMEARVSP KLQPLVQKHG GKLREDKPGN
WRQFIFKKER SIARKIALRQ RANEHLTPEH AAARVRDTLR YEVILPAEGF GKAVDTILKT
LGRHGLKAMR LKNAFMRPDT TYAGLNVNLR LADASAPGDF EIQFHTAHSL STKLKMHRDY
EKVRELPPAD ARIDGDEAGL DFNAERERRL KKMRDAAALV ERPQGIETLI PFDLYQDA
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