Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05464 |
Symbol | RSp0307 |
ID | 1222439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 401935 |
End bp | 403023 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637240167 |
Product | oxidoreductase protein |
Protein accession | NP_521868 |
Protein GI | 17548528 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.103651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACAT GGCCGGATAC CCGCCTGCTC GCGCTGTTCC AGATCGATGT GCCCATCGTG CTGGCGCCCC TCGCGGGGGT CGGCGGCGTG GAGCTGGCGG TGGCCGTCGC GCGTGCCGGC GGGCTCGGCT CGCTGCCGTG CGCGATGCTA AATGCCGACC AGATCCGCGA ACAGGTCGGG CAGTTCCGGG CGGCGGTGCG CGCGCCCATC AACCTGAACT TCTTCTGTCA TGTGCCGCCG CAGCCCGACC CCGAGCGGGA AGCGCGATGG CGCGCGCACC TGGCGCCGTA CTACGCCGAA TTCGGCATCG ATCCCGCCGC CACCGCACCG TTCGTCAATC GCGCGCCGTT CGATGCGGCG GCCTGCGCGG TGGTCGAATC GCTCAGGCCC GAGGTGGTGA GCTTCCACTT CGGCCTGCCG GAGGCCGGGC TGCTGGCGCG CGTGCGCGCG GCCGGCGCCA GAATCCTCGC CTCGGCCACC ACCGTGGAAG AAGCGTGCTG GCTGGAGGCG AACGGCTGCG ACGCCGTGAT TGCCCAGGGT GCCGAGGCGG GCGGGCACCG CGGCATGTTC CTGGCCACGG CCGTCGAGTC GCAGGTCGGC ACGTTCGCGC TGGTGCCGCA GGTGGCCGAT GCGGTGCGCG TGCCGGTGAT CGCCACGGGC GGCGTGGCCG ATGCGCGGGG CATGGCGGCG GCCTTCGCGC TGGGCGCCGC GGGTGTGCAG ATCGGCACGG CCTACATGCT GTCGCCGGAA GCGAAGACCT CCGCCATCCA CCGCGCGGCG CTCAAGCGCG CCGCCGACGG CGATACCGCG CTGACCAACC TGTTCACCGG CCGCCCCGCG CGCGGCATCG TCAACCGGCT GATGCGCGAG ATCGGTCCGA TGAGCTCCTT CGCGCCCGCT TTCCCGACCG CCGGTGGCGC GCTCGCGCCG CTGCGCGCCA AGACCGAGCC GGCCGGTTCG GGCGATTTCA TCAACCTGTG GTCGGGCCAG GCGCCCCGGC TGGCGACGGA GGACAGCGCC GAAGCCATCA CCCGCCGTAT CGCCGCGCAG GCCCTGGCGC GGCTGGCCCC GGCGACCCGT CTCGCCTGA
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Protein sequence | MGTWPDTRLL ALFQIDVPIV LAPLAGVGGV ELAVAVARAG GLGSLPCAML NADQIREQVG QFRAAVRAPI NLNFFCHVPP QPDPEREARW RAHLAPYYAE FGIDPAATAP FVNRAPFDAA ACAVVESLRP EVVSFHFGLP EAGLLARVRA AGARILASAT TVEEACWLEA NGCDAVIAQG AEAGGHRGMF LATAVESQVG TFALVPQVAD AVRVPVIATG GVADARGMAA AFALGAAGVQ IGTAYMLSPE AKTSAIHRAA LKRAADGDTA LTNLFTGRPA RGIVNRLMRE IGPMSSFAPA FPTAGGALAP LRAKTEPAGS GDFINLWSGQ APRLATEDSA EAITRRIAAQ ALARLAPATR LA
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