| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05447 |
|---|
| Symbol | RSp0320 |
|---|
| ID | 1222452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 419471 |
|---|
| End bp | 419983 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637240180 |
|---|
| Product | transcription regulator protein |
|---|
| Protein accession | NP_521881 |
|---|
| Protein GI | 17548541 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.015587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGG GTTGTCCCGC CAAGCCACGC CTCATCATGA AAATCGGCGA ACTCGCACAG
CGCACCGGCG TCAGCATCGA AACCATCCGC TTCTACGAAG CGCAGGGCCT GCTGCCCCCG
CCGGCGCGCG CCGCCAACAA CTACCGCGTC TACACGCCCG AGCATGCCGA GCAGCTGGCC
TTCATCGCCA AGTGCCGGTC GCTCGACATG GCGCACGCCG AAATCCGACG GCTGATGGAG
CTGCAGGCCA ACCCCCAGGC GTCGTGCAAG GAAATCAACC GCCTGCTCGA CGAGCACCTG
CGCCATGTCG AAGCCCGCAT CGCCGAGCTG ACCGAGCTCA AGCGCCAGAT CGAGGCGATC
GGGCAGCGGT GCACGACGGC CGCCTCCGTG GCGGAGTGCG GCGTGCTGCA GTCGCTGCAC
GAAGAGCCGC TGCCGGCCAG GGGCGCCGAT CACCATGCCG ACCATGCGGA TGCGGAGCAC
GCGCATCGGC ATATCCGCGG CGTGCATCGC TGA
|
|---|
| Protein sequence | MLEGCPAKPR LIMKIGELAQ RTGVSIETIR FYEAQGLLPP PARAANNYRV YTPEHAEQLA
FIAKCRSLDM AHAEIRRLME LQANPQASCK EINRLLDEHL RHVEARIAEL TELKRQIEAI
GQRCTTAASV AECGVLQSLH EEPLPARGAD HHADHADAEH AHRHIRGVHR
|
|---|
| |