Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05363 |
Symbol | RSp0832 |
ID | 1223139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1051148 |
End bp | 1052038 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240692 |
Product | hypothetical protein |
Protein accession | NP_522393 |
Protein GI | 17549053 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00449707 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCATGCCG GCGTCGAACG GATCGGCACC ATGCGCTGCG GCGTGGGCGA GAGCCCGGTC TGGCACCCGC GCGAGCAGGC GCTGTACTGG ACCGACATCC CGGGGCGCAC GCTGTGGCGC TGGAACCCGG CCACCGGCCA CGCCGATGCC TGGCCGCTGC CCGAGATGGC GGGCTGCATC GCCATGCTGG ACGACGGCTG GGCGCTGGCG ATGGAAACGG GCGTCTTCCG CATCCCGCAG CTGGAGGCCG GCCTGCCGGT GCCCGCGCCC AGGCAACTGG CGTCCGTGCA GCACGCCCGT CCCGATATGC GCTTCAACGA CGGCCGCTGC GACCGCCAGG GGCGCTTCTG GTCCGGCACC ATGGTGCTGG ACACCGCGCT GGGCGTGCCG GCCGGCAAGC TCTATCGCCT GGACAGCCGG GCCGGCCGCG TCGAGGCAGT GGCGGGTGAC CTGATCGTGC CCAACGGCCT GGCCTTCAGC CCCGACGGCC GCACGCTGTA CTTGTCGGAC TCCCACGCCT CGCGCCAGGC CGTGTGGGCG TTCGACTACG ACATCGACAC CGGCACCCCG CACAACCGCC GCCTGTTCAT CGACATGCAT GCCCACCCCG GCCGCCCCGA CGGCGCCGCG GTGGATGCCG ACGGCTGCTA CTGGATCTGC GGCAACGATG CGGGCCTCGT GCACCGCTTC ACGCCGCAGG GCCGGCTCGA CCGCAGCCTG CCCGTGCCGG TGGCTAAGCC CGCGATGTGC GCGTTCGGCG GGCCCGGCCT GGACACGCTG TTCGTGACCT CGATCCGCGT GGACGGCGAT TCGCTGTCGG GTGCGACTTT CGCCCTGTGT CCTGGCACAC GGGGTCTCGA TGAACCAACA TTGCGCATGG ATTCACCCTG A
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Protein sequence | MHAGVERIGT MRCGVGESPV WHPREQALYW TDIPGRTLWR WNPATGHADA WPLPEMAGCI AMLDDGWALA METGVFRIPQ LEAGLPVPAP RQLASVQHAR PDMRFNDGRC DRQGRFWSGT MVLDTALGVP AGKLYRLDSR AGRVEAVAGD LIVPNGLAFS PDGRTLYLSD SHASRQAVWA FDYDIDTGTP HNRRLFIDMH AHPGRPDGAA VDADGCYWIC GNDAGLVHRF TPQGRLDRSL PVPVAKPAMC AFGGPGLDTL FVTSIRVDGD SLSGATFALC PGTRGLDEPT LRMDSP
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