| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05193 |
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| Symbol | RSp0230 |
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| ID | 1222361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 288021 |
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| End bp | 288788 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637240089 |
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| Product | 3-alpha-hydroxysteroid dehydrogenase |
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| Protein accession | NP_521791 |
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| Protein GI | 17548451 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00510841 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.489476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTCG GCAACAAGAC CATCGTGGTG ACGGGCGTGT CGTCCGGCAT CGGCGCGGAG
ACCGCGCGCC TGCTGCGCTT CCACGGCGCG CGCGTGATCG GCGTGGACCG CAACGCGCCG
GGCACCACGC TGGACGGCTA CGTGCAGGCC GATCTTTCCA CCGCGCAGAC GATCGATGCG
GCGGTGGCGC AGCTGCCGTC GCGGGTCGAC GCGCTGTGCA ACATCGCCGG TGTGCCGGGC
ACCGCGCCGG TCGACCTGGT CGCGCGCGTC AACTATCTGG GGCTGCGCCA TCTGACCGAG
CGCCTGCTGC CGCGCATGCC AGAGGGCGGG GCCGTCGTCA ACGTCGCGTC GGTTCTCGGC
GCCGAGTGGC CGCAGCGGCT GGATCAGCAC AAGGCGCTGG CCGGCGCCGC CGGCTTCGAG
GCGGGCGCGG CCTGGCTGGC GGCCCATCCC GTGCCGCAGC CGAGCTGCTA CCAGTACTTC
AAGGAAGCGC TGATCGTGTG GACGCTGACG CAGTCGCAGC CCTGGTTCCT CCAGCATTCG
GTGCGCATGA ACAGCGTGGC GCCCGGGCCG GTGTTCACGC CCATCCTCGG TGATTTCGTC
ATCATGCTCG GCGCCGAGCG CGTGGAGCGG GACGCGCACC GGATGAAGCG TCCGGCCTAT
CCCGACGAGA TCGCGCCGGT GATCGCGCTG CTGTGCGCCG ATGAGACGCG CTGGGTCAAC
GGCGTGAACC TGCCGGTCGA CGGCGGGCTC GCCTCCACCT ACTGCTGA
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| Protein sequence | MQLGNKTIVV TGVSSGIGAE TARLLRFHGA RVIGVDRNAP GTTLDGYVQA DLSTAQTIDA
AVAQLPSRVD ALCNIAGVPG TAPVDLVARV NYLGLRHLTE RLLPRMPEGG AVVNVASVLG
AEWPQRLDQH KALAGAAGFE AGAAWLAAHP VPQPSCYQYF KEALIVWTLT QSQPWFLQHS
VRMNSVAPGP VFTPILGDFV IMLGAERVER DAHRMKRPAY PDEIAPVIAL LCADETRWVN
GVNLPVDGGL ASTYC
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