Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS04822 |
Symbol | RSp1357 |
ID | 1223669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1706065 |
End bp | 1706985 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637241220 |
Product | transcription regulator protein |
Protein accession | NP_522916 |
Protein GI | 17549576 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCTTC GTCGACTCAG ATACTTCGTG GTTCTAGCCG AAACCCTGCA TTTCGGCCGT GCGGCTTTGC GCTTGAGCAT CGCGCAGCCG CCTCTTAGCC ATCAGATTCG AGTGCTGGAG GAAGAACTCG GCGCGCGTCT GTTCGACCGG AACAATCGTC GCGTCGAGCT GACGGCGGCG GGAATGGCGC TCCTGCCAGA GGCGCGCGCG CTACTGGCGC AAGCTGAAAA GGCAAGTACG ATTGCCGCGC GAGTTGAACG GGGCGAGTTG GGGGAGCTTC GAATTGGTTT CACGAGCGCG GCAGCCCTCA CGCAAGTGAT CCCACGCCTG ATACTTGCCT ACCGTCGTGA TTGGCCGGGC GTGCGGTTGA GCATCCGCGA ATTGACGACA CAGGAACAGT TGACCGCGAT GCTTGAGCGA CGTCTCGACT TTGCGTTTGT ACGTGGAACA GCAGCGCCAG ATTTGCCTCC GGCGTTCGGA GCGGTGCGTT TGTTTGAAGA TGCTTTCGTA GTGGCGCTTC CGCCCCAGCA CCCGTGTGCC GACAATGACG GGTCGCTTTT CGTAAAAGCC TTGGCCAACG AACCATTTGT TATGTACCCC CCCGAAAGCG GCACGGGGGC ATACGAGCAG GTACTGTCCC TATGCCGTCA CGCGGGCTTC GCCCCGCAGG TCGTCCAGGA GGCTCTGTCC GCCGCAACGA TGGTAGGCCT GGTGGCGGCC GGGCTAGGCG TAGCGCTAGT GCCGGAATCA TTCCAGCGCA TCGAAGCGAG CGGGGTGGCC TTTCGTGCGT TGCGCGATAG CCAGGCCAAA TCAGCAATGT GGTTAGTCTT CCGTGCTGAC GAGGTCTCTG TTCGTGAAGC TGCGTTCCTG GAGCTTGCCG GTGTCATCAA AAAACCACGG CGATCGCGGG CATCCGTTTA G
|
Protein sequence | MDLRRLRYFV VLAETLHFGR AALRLSIAQP PLSHQIRVLE EELGARLFDR NNRRVELTAA GMALLPEARA LLAQAEKAST IAARVERGEL GELRIGFTSA AALTQVIPRL ILAYRRDWPG VRLSIRELTT QEQLTAMLER RLDFAFVRGT AAPDLPPAFG AVRLFEDAFV VALPPQHPCA DNDGSLFVKA LANEPFVMYP PESGTGAYEQ VLSLCRHAGF APQVVQEALS AATMVGLVAA GLGVALVPES FQRIEASGVA FRALRDSQAK SAMWLVFRAD EVSVREAAFL ELAGVIKKPR RSRASV
|
| |