Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS04776 |
Symbol | RSp1347 |
ID | 1223659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1698945 |
End bp | 1700030 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637241210 |
Product | 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein |
Protein accession | NP_522906 |
Protein GI | 17549566 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAA CTTTCTCCGT TCCTAATTTG CATGCGGAGT GGCCGATGCG TACCGTGACG ACAGCAGGTT TTGCCTTTGT CGAGTTTGTC TGCCCGGAGC CCGAAGAGCT GGTTGCCCTG TTCGGGAAGC TCGGGTTCAA GGCACAGGGG CAACATGCGC AGACGGGGGC GGTTCTCCTG CGCCAGAACG AAGCGGCCCT GATCGTGAAC CCCGCGCCGA ATCCGTTCCG CGATGTTCAC GGCGCATCCG CGCGGGCGAT CGCGATCCAC GTGGACGACG CAGCGAATGC CCTGGCGCAG GCGCTGGCCG GTGGCGCCCG TCGGGCAACA CCGGCCGAGT GCGGCGCGTT CGTCGTCGAT GCGCCGGCGA TCGTCGGCAT TGGCGACAGC CTGGTCTACT TCGTCGATCA CGACATCGAA TCGGCGTTTT CGACGCCGTA TCGGCCAGGG CAGCCCATCG CGGTGGCGGA GGCCGCCATC CAGTCGATCG ACCACACCTC GAACATCGTC AAGCCGGAGA ACCTCGACCA CTGGGCCGAC TTCTACAAGG ACACCTTTGC CTTCGTCCAG AAGCAGTACC TGGACGTGAA AGGCCGGCAG ACGGGGATGC GCGCGCGCTC GATGGTGAGC CCGTGCGGAA AGGTGTCGAT CCCGATTGCC GCCGCCGCGC ACGACCAGCC CGGCGTGCTG AACCAGAACG ACGAGTTCAT CCGCGACTAC CGCGGTGAGG GCATCCAGCA CATCGCTTTC CTGTCTTCGA ACATCGAGCA GACCATCGCG GCCATGGAAA CCGCCGGCAT CGAGTTCATG GAGACGCCGC CCAAGACCTA CTACCAGAAC CTGGATGGTC GGGTTCCCGG TCACGGGCAG AACCTCGACA GCATGGAGCG CCGGGGCATT CTCGTCGACG GCAAGGGCGG CGGCCGGATC CTGCTGCAAC GCTTCACGCG CCGCCAGATC GGCCCGATGT TCTTCGAGAT CATCGAGCGG CGCGGCGAGG ACGGTTTCGG CGAAGGCAAT TTCAAGGCGC TCTTCGAATC CCAGGAGCAG GACCAGGTCC GGCGCGGGTC GTTGAACGCC GCGTAG
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Protein sequence | MKQTFSVPNL HAEWPMRTVT TAGFAFVEFV CPEPEELVAL FGKLGFKAQG QHAQTGAVLL RQNEAALIVN PAPNPFRDVH GASARAIAIH VDDAANALAQ ALAGGARRAT PAECGAFVVD APAIVGIGDS LVYFVDHDIE SAFSTPYRPG QPIAVAEAAI QSIDHTSNIV KPENLDHWAD FYKDTFAFVQ KQYLDVKGRQ TGMRARSMVS PCGKVSIPIA AAAHDQPGVL NQNDEFIRDY RGEGIQHIAF LSSNIEQTIA AMETAGIEFM ETPPKTYYQN LDGRVPGHGQ NLDSMERRGI LVDGKGGGRI LLQRFTRRQI GPMFFEIIER RGEDGFGEGN FKALFESQEQ DQVRRGSLNA A
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