| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS04763 |
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| Symbol | RSp1338 |
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| ID | 1223650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1689089 |
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| End bp | 1690711 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637241201 |
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| Product | hypothetical protein |
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| Protein accession | NP_522897 |
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| Protein GI | 17549557 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC GACGCAGCTT CCTGATCGGC GCGGCCGTCA CCGGTGTGGC GGCGTCGGGC
CTGGCCTCGT GGGCCGGCCT GCGCGCCATC ACCGAGATCA CGCCCAACGT GCGCCTGCCG
GGCCAGGCCG CCGGCCACCG CCTGCGCGAC ATGAAGGCCC TGCCCGCGCC CGCCGAGACG
CGCCGCGTGG GCGTGGCGAT CTGCGGCAGC GGCATCGGCG GCCTGAGCTG CGCCTGGCGG
CTCGCCAAGG GGGGGCAGCG CGACGTGGTC GTGGTCGAGG GGCCCGAGCG CTTCGGCAAC
GCGGCCGGCG GCGCGTTCGG CACGCAGCGC TTTCCGACCG GCGCGCACTA CCTGCCGCTG
CCGTCGATGG AATCGACGCA CGTGCGCGAG ATGCTGACCG ACTTCGGCGT GATCGAGCGC
GACCCGTTCG GCCTGCGCCC GACCTACGAC GAGCGGGTGC TCGTCCACGC GCCGGACGAG
CGCCTGTGGC TCGGCGACCG CTGGCAGGAC GGCTTCGTGC CGCACGACGG CATCTCCGAA
GCCGAGCGTG CCGAGCACAC CCGCTTCTTC GCCCACGTCG ACCGCCTGCG CCAGACCGCC
GGCCGCGACG GCCGCCGCCT TTTCACAGTG CCCACCGCGC TCGCCTCCGC CGACCCGGCC
TGGCGCGCGC TCGATGCGCT GAGCTTCCGC GACTGGCTGC ACCGCGAAGG CTACCGCGCC
GCCACCCTGC ACTGGTACGC CGACTACTGC TGCCGCGACG ACTACGGCGC CACCGCCGAC
CATGTCTCGG CCTGGGCGGG CCTGGCCTAC TTCGCCAGCC GCGGCGGCCT CGCCGCCAAC
GCCGAGCCGG GCACCATGCT GACCTGGCCC GAGGGGCTCG ACTGGATGGC CCACCGCCTG
TCCGACGCCG CCGGCCTGAA CGAGCCCGGA CGCCTGCTGG CCGGCAGCGC CGCCCGCATC
GGCCACACCC GCGAAGCCGG CGCCCGCGTC TTCGCCGATG TGCTGGAACC GGACGGCCGC
GTGGTACGCC TGCTGGCCGA CCACGTGGTC AGCGCGATGC CGCTGCATGT CGCCAAGCAT
GTCGTCGAAG GCTTCGACGT GCCCGCCGCC GAACTGCCCG AGGCCGCGCC GTGGCTGCTC
GCCAACCTGC TGATCGACGG CTTCCCGCGC GAGCACGACG ATGCGCCGCT GGCGTGGGAC
AACGTGGTCT ACCGCGGCAC CGGCCTCGGC TACGTGGTGG CCAATCACCA GGACATCCGC
GTCGGCCCGC CGGAGCAGTC CGTCTTCACC GCCTACGTGG CGCTGTCCGA CATGACGCCC
AAGGCCGCGC GCGAATGGCT GAGCCAGGCC GCGCCGCAAA CCCTGCTGGA ACGCGCGATG
CGCGATCTGG ACACCGTGTA CGGCATCCGC CTGCGCGCCC AGATCCGCCG CGCGGACCTG
ACCCTGCGCG GGCACGGAAT GGCGATCCCC TCGCCCGGCT TCCTGTCCCG CCCCGGCATC
GCGCGCCTGC GCGAGAGCGC CGGCCCGATC CACTACGCGC ACGCCGACCT GTCGGGCTAC
TCCGTCTTCG AGGAAGCCGC CTGGTGGGGC GACCAGGCGG CGCGGCGCAT CCTCGCGCGC
TGA
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| Protein sequence | MTTRRSFLIG AAVTGVAASG LASWAGLRAI TEITPNVRLP GQAAGHRLRD MKALPAPAET
RRVGVAICGS GIGGLSCAWR LAKGGQRDVV VVEGPERFGN AAGGAFGTQR FPTGAHYLPL
PSMESTHVRE MLTDFGVIER DPFGLRPTYD ERVLVHAPDE RLWLGDRWQD GFVPHDGISE
AERAEHTRFF AHVDRLRQTA GRDGRRLFTV PTALASADPA WRALDALSFR DWLHREGYRA
ATLHWYADYC CRDDYGATAD HVSAWAGLAY FASRGGLAAN AEPGTMLTWP EGLDWMAHRL
SDAAGLNEPG RLLAGSAARI GHTREAGARV FADVLEPDGR VVRLLADHVV SAMPLHVAKH
VVEGFDVPAA ELPEAAPWLL ANLLIDGFPR EHDDAPLAWD NVVYRGTGLG YVVANHQDIR
VGPPEQSVFT AYVALSDMTP KAAREWLSQA APQTLLERAM RDLDTVYGIR LRAQIRRADL
TLRGHGMAIP SPGFLSRPGI ARLRESAGPI HYAHADLSGY SVFEEAAWWG DQAARRILAR
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