| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03881 |
|---|
| Symbol | RSp0598 |
|---|
| ID | 1222905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 730954 |
|---|
| End bp | 731895 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637240458 |
|---|
| Product | putative response regulator transcription regulator protein |
|---|
| Protein accession | NP_522159 |
|---|
| Protein GI | 17548819 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.521949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.59764 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGC AGGAAGTTGA TGAACGGACC AATCTGACGA ACAACAATCG CTTCGAGCTG
CTGCTGTTTC GCCTGGGCGA ATCGCAGCGC AGCCAGCGGG AACTGTTCGG CATCAACGTG
TTCAAGGTGC GCGAGATCAT GGTCATGCCG CCGGTGACGC ATGTGGCGGA TGCCGGCGCC
CACATCCTGG GGGCGGTGAA TGTGCGCGGC CAGATCATCC CGGTGATCGA TCTGGCCAGC
GTGATCGGCT GCAAGAACGG CAATGCCAAC ATCCTGCTGA TCACCGAATA CGCGCGCAGC
ACGCAGGGCT TTGCGGTGGA AGAGGTGGAC GAGATCGTGC GCCTGGAATG GAGCCAGATC
TTTCCCGCCG AGGCGAGCGT GGGCAGCGCC AACATCACCA GCCTCGCGCG CCTGGACGGC
AATGCCGACA ATTCGCGCCT GGCGCAGGTG ATCGACGTCG AGCAGATCCT GGTGGATGTG
TTCCCGACCC GCCGCGCCGA CCTGGCGCCC GACAGCGACG GCCGCGCCAT CAAGCTGCCG
CCGGGCGCCA AGCTGCTGGT GGCCGACGAT TCCGGCCTGG CCCGTTCGCT GATCGCCAAC
GGCCTGGAGG CGATGGGGGC GCCGTTCGTG ATGACCAAGA GCGGCCAGGA AGCCTGGGAC
ACGCTGCAGA ACATCGCCCG CGACGCCGCG CGCGAGGGCA AGACCGTGCG CGACAAGATC
GCGCTGGTGC TGACCGACCT GGAAATGCCC GAGATGGACG GCTTCACGCT CACGCGCAAG
ATCAAGTCCG AGCCGGCGTT CCAGTCGATT CCGGTGGTGA TCCATTCCTC GCTGTCGGGT
TCGGCCAACG AAGACCACGT GCGTCGCGTG GGCGCCAACG GCTACGTCGC CAAGTTCGAG
GCGAACGAGC TGGCCCAGGC GATCGTCTCG GCGCTGGGCT GA
|
|---|
| Protein sequence | MSQQEVDERT NLTNNNRFEL LLFRLGESQR SQRELFGINV FKVREIMVMP PVTHVADAGA
HILGAVNVRG QIIPVIDLAS VIGCKNGNAN ILLITEYARS TQGFAVEEVD EIVRLEWSQI
FPAEASVGSA NITSLARLDG NADNSRLAQV IDVEQILVDV FPTRRADLAP DSDGRAIKLP
PGAKLLVADD SGLARSLIAN GLEAMGAPFV MTKSGQEAWD TLQNIARDAA REGKTVRDKI
ALVLTDLEMP EMDGFTLTRK IKSEPAFQSI PVVIHSSLSG SANEDHVRRV GANGYVAKFE
ANELAQAIVS ALG
|
|---|
| |