| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03671 |
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| Symbol | RSp0291 |
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| ID | 1222423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 378280 |
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| End bp | 379623 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240151 |
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| Product | hemolysin secretion-like transmembrane protein |
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| Protein accession | NP_521852 |
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| Protein GI | 17548512 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.107434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC GGCACCGCTG GGAAGCCTGG AGCGAGCTGT GGCAGCGCTA CCGGGATGTC
TTCCGCCACT ACTGGAAGCA GCGCGACGCG CTGAGCCTGC CCCGCTTCGA GGTGCACGAG
GCGGAATTCC TGCCCGCGGC GCTGTCGCTG CAGGCGCAGC CCGTCTCGCC CGCGGGGCGA
TGGGTGGCCC GCATCCTGAT GCTGCTGATC GTGGTGCTGC TGCTGTGGTC GATCCTGGGC
AAGGTGGACA TCATCGTCAA CGCGACGGGC AAGATCATCC CGTCCGAGCG GACCAAGACC
ATTGCCGCCG TGGAAGTGGC CACCGTGCGC AAGCTGCATG TCGAGGAAGG ACAGATCGTC
AAGGCGGGCG ATGTGCTGAT CGAGCTGGAC GCGCGCGCCA GCGACAGCGA ACGCGACAAG
GCCGTCGGCA ACGAACAGCT GGCGCGCCTG CAGGCGGCGC GCTCGCGCGC CCTGATCGGC
GCCCTCGACC AGGGCGGGAC GCCGCACCTG CCGCCGCTCG AAGGCATTCC GCCCGAGCGC
TTGCACGAGG CCGAGCAGCA CCTGGCCGAC CAGTGGCGCG ACTACACCGC AAAGCTCAAC
CGGCTGGACG GCGAAATCCG CCGCTATGCC GAAGCGCTGC CGCTCGCCAC GCAGCGCGCG
CGCGACTACG CCGACCTGGC GAAAGACCAC GACGTCTCGC AGCACGCCTA TCTCGAGAAG
GAGCAGGCGC GCATCGACAT CGAAGGGCAG CTCCGGGATG CCCGGGACCA GAAGGCCGCG
CTGACGGCGG AGACCCGCCG CGTCGCACAG GACAGCCTGA CCGACGCCAA GAAGGTCCTG
GGCGAATCGT CCGAGGATGC GCGCCGCGCG AGCGTCCACA GCGAACAGCT TAGGCTCGTG
GCGCCGGTGA GCGGCACAGT CCAGCAGCTG ACGGTGCACA CCGTCGGCAC CGCGGTGCCG
GTGGCGCAGC CGCTGATGCA GATCGTTCCC GAGCAGAGCG TGGTGGAAGT CGAAGCCTTC
CTGGAAAACA AGGACGTCGG CTTCGTGCAG GAAGGCCAGG ACGCGCAGGT GAAGATCGAC
ACGTTCGAAT ACACCAAGTA CGGCACGATC CCCGCGCGTG TGACGCACGT CTCGCGCGAT
GCGATCGAGG ACGAGAAGAA GGGGCTGATC TACTCGGTCA TGGTGACGCT GGACAAGACG
TCGATCGATG TGGATGGGCG CAAGATCAAG CTGTCGCCCG GCATGAGCAC GACCGTCGAG
ATCAAGACGG GGACGCGCCG TGTCATCGAA TACGTGCTGT CTCCGCTCAT CCAGCATGCA
CGGGAGAGTC TGCGTGAGCG GTAA
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| Protein sequence | MSLRHRWEAW SELWQRYRDV FRHYWKQRDA LSLPRFEVHE AEFLPAALSL QAQPVSPAGR
WVARILMLLI VVLLLWSILG KVDIIVNATG KIIPSERTKT IAAVEVATVR KLHVEEGQIV
KAGDVLIELD ARASDSERDK AVGNEQLARL QAARSRALIG ALDQGGTPHL PPLEGIPPER
LHEAEQHLAD QWRDYTAKLN RLDGEIRRYA EALPLATQRA RDYADLAKDH DVSQHAYLEK
EQARIDIEGQ LRDARDQKAA LTAETRRVAQ DSLTDAKKVL GESSEDARRA SVHSEQLRLV
APVSGTVQQL TVHTVGTAVP VAQPLMQIVP EQSVVEVEAF LENKDVGFVQ EGQDAQVKID
TFEYTKYGTI PARVTHVSRD AIEDEKKGLI YSVMVTLDKT SIDVDGRKIK LSPGMSTTVE
IKTGTRRVIE YVLSPLIQHA RESLRER
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