Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03185 |
Symbol | RSp1241 |
ID | 1223553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1579111 |
End bp | 1579671 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637241106 |
Product | hypothetical protein |
Protein accession | NP_522802 |
Protein GI | 17549462 |
COG category | [K] Transcription |
COG ID | [COG1510] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0864529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTT CCCCCTTGAA GCAGCGCTTC GTGCTGCATT TCGGCGAGAT GGGCAGCCGC TGGGGCATCA ACCGCACGGT CGGACAGATC TATGCGCTGC TCTATGCCTC GCGCGAGCCC ATCAACGCGG ACGAGATCGC CGAGGCGCTG GGCTTTTCAC GCTCCAACGT CAGCATCGGC CTCAAAGAGC TGGAGTCGTG GAAGCTGGTC CGGCTGACCC ACAAGCCGGG CGACCGGCGC GAATACTTCT CCGCGCCCGA CGACATCTGG ACCATCTTCC GCACGCTGGC CGAGGAGCGC CGCAAGCGCG AGATCGATCC CACGCTGTCC CTGCTGCGCG ACGTGATGCT CGAATCCCCG GGCGACCCCG ACGACCGCCA CGCCCAGGCG CGCATGAAGG AGATGTACCG GCTCATCACG CTCGTCACCA CGTGGTTCGA CGATGTGCAG AAGCTCGATG CCGACGCCCT GCAGCAGCTG ATGAAGATGG GCGCCAAGGT GCAGAAGCTG CTGGAAATGA AGAACAAGCT TGCCGTGGTG GTTGGCGGCA AATCGAAGTA G
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Protein sequence | MQLSPLKQRF VLHFGEMGSR WGINRTVGQI YALLYASREP INADEIAEAL GFSRSNVSIG LKELESWKLV RLTHKPGDRR EYFSAPDDIW TIFRTLAEER RKREIDPTLS LLRDVMLESP GDPDDRHAQA RMKEMYRLIT LVTTWFDDVQ KLDADALQQL MKMGAKVQKL LEMKNKLAVV VGGKSK
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