| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03179 |
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| Symbol | RSp1235 |
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| ID | 1223547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1569331 |
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| End bp | 1570263 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637241100 |
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| Product | transcription regulator protein |
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| Protein accession | NP_522796 |
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| Protein GI | 17549456 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.379949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.13271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAACT TCCGACTCAT CCGGCACCTC TGGCTCTTTC ACGCTGTTGC CGAAGAACGC
AACTTCAGCC GCGCGGCCAA GCGCCTGGGG ATGTCCCAGC CGCCGCTGAC GGACCAGATC
AAGGTGCTCG AGCACGCACT GAAGATCAAG CTGTTCGAGC GTTCGCGCCG GGGCGCCCAG
CTCACCCCGG CCGGGGCGGC CATCCTGCCG GCCGTGCAGA AGTTCGTGCG GCAGCTCGAG
CAGCTGGAGT TCGCGGTGAA GGAGGCCGCC GCCGGCCAGA AGGGCACGCT CACCGTCGGC
GCGGTCAGCA CGGCGCTGCT CAATGAACTA CCCGTGCTGC TCGACCGGCT GCGCGCGACG
CATCCCGACC TCACGGTCGC GGTGAAGGAG ATCGACAGCG TGGACGCGGT CCCGATGCTC
AACGCCGGCG ACATCGACAT CGCCTTCGCC AGGCTCGAAG GCGAGCTGGG GCCCAATATC
CGCTCGCTGC CGCTGGCCGA CGACCGGCTG GCGGTGGCGC TGCCCCAGGA TCACCGGCTG
GCCAAGGGGA CGCGGATCAA GCTGGCCGCC CTGGTCGAAG AAGACTTCGT GATGTTCGCC
AGGCATGTCA GCCCGGTCTA CTTCGACGCG CTGACCGCCG TGTGCCTGGC GCACGGCTTC
TCCCCGCGCG TGCTGCACGA GGTGCGCTCG GTCTCGTCCC AGGTGGCTTT CGTCGGCTGC
GGCCAGGGGA TCGCGCTGGT GCCGGCGGCC ATGAAGAGCT TCGCGCCCGA CAACGTCGTC
GTGCGGCCGC TGACCGAGCG CATCCGCGTC GTGACGACGG CCATGGCGTG GAACAGCGCC
CGCGAGAATC CGCTGATCGA CCAGGTCATC GCCTGCCTGC CGCCCAGGCG CCCGAGCGAG
CCGACCGGTC GGCGCGGCGC GGCCAGCGCG TGA
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| Protein sequence | MINFRLIRHL WLFHAVAEER NFSRAAKRLG MSQPPLTDQI KVLEHALKIK LFERSRRGAQ
LTPAGAAILP AVQKFVRQLE QLEFAVKEAA AGQKGTLTVG AVSTALLNEL PVLLDRLRAT
HPDLTVAVKE IDSVDAVPML NAGDIDIAFA RLEGELGPNI RSLPLADDRL AVALPQDHRL
AKGTRIKLAA LVEEDFVMFA RHVSPVYFDA LTAVCLAHGF SPRVLHEVRS VSSQVAFVGC
GQGIALVPAA MKSFAPDNVV VRPLTERIRV VTTAMAWNSA RENPLIDQVI ACLPPRRPSE
PTGRRGAASA
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