Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03039 |
Symbol | RSp1502 |
ID | 1223814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1883622 |
End bp | 1884413 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637241365 |
Product | signal peptide protein |
Protein accession | NP_523061 |
Protein GI | 17549721 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.546797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0494056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCC TGACCTCGCG CATCGCAGCC GTGCTGGTGG CGCTGGCCAG CGCCGCCGCA CAGGGCGCCG CCTACGTGCG GCTGCCCGGC GGCGATTTCG ACAGCGTGCT GCCGCAGAAC GCGCCGGGCC GGCCGCAGCG GGTGCGCATC GAACCCTTCG AGCTGCGCGC CACGCCTGTC ACCGTCGCGG ATTTCCAGGC CTTCCTGCAG ACCCATGAAG CCTGGCGCCG CGACCGCGTG CCCGAGGTTT TTGCCGGCCC CGCCTACCTG GCCGATTGGG CCGACGCGCT GCACCCGGCC CCGCAGGCGT CGCCGCAAGC GCCGGTGACG GGCGTGAGCT GGTTTGCCGC GCGCGCCTAC TGCGAGAGCG AGGGCGCGCG CCTGCCGACC TGGCTGGAAT GGGAGTCGGC CGCCGCGGCC GACGCCACCC GCGCCGATGC GCGCGACGAC CCGCAATGGC GCCAGCGCAT CCTGACCTGG TACGAGCGGC CGGCGGCGCG CGTGCTGCCG CCGGTCGGCG GCCCGCCGGA CGTGCATGGC GCGCGTGATC TGCATGGCCT GATCTGGGAG TGGGTCGACG ATTTCAACGC GCTGTTCATC AGCGGCGACA GCCGCACGCA GGGCGATCCG GACAAGCAGA AGTTCTGCGG CGCCGGCGCC ATCAGCATCG TGCGGCGCGA CAGCTACGCC GTGCTGATGC GCGTAGCGCT GCTGTCTTCC CTCGGTGGCG CGGATGCCAC GGGTAGCCTG GGCTTCCGCT GCGCCAGAAC CCTCAATGGA GACCCTCCAT GA
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Protein sequence | MARLTSRIAA VLVALASAAA QGAAYVRLPG GDFDSVLPQN APGRPQRVRI EPFELRATPV TVADFQAFLQ THEAWRRDRV PEVFAGPAYL ADWADALHPA PQASPQAPVT GVSWFAARAY CESEGARLPT WLEWESAAAA DATRADARDD PQWRQRILTW YERPAARVLP PVGGPPDVHG ARDLHGLIWE WVDDFNALFI SGDSRTQGDP DKQKFCGAGA ISIVRRDSYA VLMRVALLSS LGGADATGSL GFRCARTLNG DPP
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