Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03012 |
Symbol | RSp0110 |
ID | 1222513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 125362 |
End bp | 126420 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637239969 |
Product | hypothetical protein |
Protein accession | NP_521671 |
Protein GI | 17548331 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.606349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGCGTG TCATGCCGCT GTGGAGTGCG TTGTCGCGCG CGCTGCCGGG CCTGCGCCTC GCGCGCGAGC GCGTGCAGCG TTTCCTGTCG CGCCCGCGCC GTCCGCGCGA CGGTGCGATC CGTCTCGACC GCCGCCACGT CTACATCCTG CCCACCGCAA CCGGGGCCGG CTTTGCGCTG CTGCTGGTCG CCATGCTGCT GACCTCGCTC AACTACAACG TCAGCCTCGG TTTCCTGCTG ACCTTCCTGC TGGCGGGCGT GATGGCCTCG GCCATGTGGC AGACGCACCG CAACCTGGTC GACCTGGAGG TGCGCGGCGC GGTGGGCGAG CCCGTGTTTG CGGGCCGCGC CGTCAACGTG AGCGTGGCGC TGGCCAACGC GACCGCATGG GCGCGCGTGG GCGTGGAGAC CGGCGCGCGC GATGCGGCAT CGGCGGAGTC CTCGCTCGAC GCGCACGACG GCACGCTGAC GGCGCTGTCC TTCGGGGCGC AGCCGCGCGG CTGGTTCCGC CTGCCGCGCC TGACCGTGTC GACGCGGTTT CCGCTCGGGC TGTTCCGCGC CTGGAGCTAT GCCGATGCGC CGCTGACGCT GCTGGTCTAC CCCGAGCCGG AGGCCGCCGC GCCGCCGCTG CCGGCCGCCT TCGCGCCCGA TCCCGGCGAG GCGGACGACC CGCGCGTCGC CCGCCCACGC CCCGATGAGG CCGCCGACCA GCTGCGGCCC TATCGCCCCG GCGATCCGCT GCGCAGCATC GCGTGGAAGC ACAGCGCGCG GCTCGACACC TGGCTCGCCC GCAGCGGCCA GCAGGTCCGC CATGCGCAAT GCGTGCTGGC GTGGGATGCG CTGCCGCCGC CGATGGAAGC GGAGGCGCGC CTGTCCCGCC TGTGCGCCTG GGTGCTGGCC GCCGAGCAGG CCCCGGCCGG CGAGGCGCCC GAATACACGC TGGTCCTGCC GGGCCTCGCG ATCGGCCCCG CGCGCGGCCC GGCGCACCGC GACGCCTGCC TGCGCGCGCT GGCGCTGTGG GGCAGGCCGC CGCTGCCGGA GCCGGAGGAG GCCGCATGA
|
Protein sequence | MVRVMPLWSA LSRALPGLRL ARERVQRFLS RPRRPRDGAI RLDRRHVYIL PTATGAGFAL LLVAMLLTSL NYNVSLGFLL TFLLAGVMAS AMWQTHRNLV DLEVRGAVGE PVFAGRAVNV SVALANATAW ARVGVETGAR DAASAESSLD AHDGTLTALS FGAQPRGWFR LPRLTVSTRF PLGLFRAWSY ADAPLTLLVY PEPEAAAPPL PAAFAPDPGE ADDPRVARPR PDEAADQLRP YRPGDPLRSI AWKHSARLDT WLARSGQQVR HAQCVLAWDA LPPPMEAEAR LSRLCAWVLA AEQAPAGEAP EYTLVLPGLA IGPARGPAHR DACLRALALW GRPPLPEPEE AA
|
| |