| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02385 |
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| Symbol | RSp1048 |
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| ID | 1223360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1327501 |
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| End bp | 1329840 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240913 |
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| Product | putative formate dehydrogenase oxidoreductase protein |
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| Protein accession | NP_522609 |
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| Protein GI | 17549269 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.350308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACC AGAAGATCGA GTTCTACCGT CATCCGGCCG GTGGCTGGGG CGCGCTCAAG
AGCGTTGCGC ACCAGTTGCT GTCGCAAGGC ATCGCCGCCA AGGGCGCCAA GACGCTGCTG
TCGGCCAACC AGCCGGACGG CTTCGACTGC CCCGGCTGCG CCTGGCCCGA CCGCGACCAT
GCCTCCACCT TCGAGTTCTG CGAAAACGGC GTGAAGGCCG TGGCGGCCGA AGCCACGGCC
CGCCGCACCA CGCCCGAGTT CTTCGCGCAG CACACCGTAC GCGAGCTGGC CGGGTGGTCC
GATTTCGCGC TGGAAGACCA GGGGCGCCTG ACGCACCCGA TGGTCTACGA CGCGACCACC
GACAAATACG TCCCCATTGA ATGGGACGCC GCCTTCGCCC TGATCGCGCA GCACCTGCGC
GCGCTGCCCG ATCCGAACCA GGCGATCTTC TACACCTCCG GCCGCACCAG CAATGAGGCG
GCCTTCCTCT ACCAGTTGTT CGTGCGCGCG TACGGCACGA ACAACTTCCC CGACTGCTCC
AACATGTGCC ACGAGCCCTC CGGCACGGGC ATGCGGAGCA GCATCGGCGT CGGCAAGGGC
ACCGTCACCC TCGACGATTT CACTCAAGCC GACGCGATCT TCATCTTCGG CCAGAACCCG
GGGACGAACC ACCCGCGCAT GCTCGGCGAG CTGCGCGAGG CCGCCAAGCG CGGCGCGGCC
ATCGTGTCGT TCAACCCGCT GCGCGAGCGC GGGCTGGAGC GCTTTGCCGA TCCGCAAAGC
AAGATCGAAA TGCTCACGCT GGGCTCGACG CGCATCAGCA CCGAATACCA CCAGGTCCGC
ATCGGCGGCG ACCTGGCCAC CGTCAAGGGC CTGATCAAGC ACGTGATCGA GCGCGACGAC
GCGGCGTGCA GCCGCGGCGA GCCCGCCATC ATCGATCACG ACTTCGTGGC CCGGCACACC
GGCGGCTACG ACGCCTTCGC CGCCGACGTG CGCGCCGAAT CGTGGGCCAC CATCGAGGCC
GAATCGGGCC TGCCCGAAGC CGAGATCCGC CAGGCCGGCG ACACCTACAT CAACGCCGGC
AGCGTGATCG CCTGCTGGGG CATGGGCATC ACCCAGCACA AGCATTCGGT GGCGACCATC
CAGATGATCG TCAACCTGCT GCTGCTGCGC GGCAACATCG GCCGCCCGGG CGCCGGCGCG
TGCCCGGTGC GCGGCCACAG CAACGTGCAG GGCGACCGCA CCATGGGCAT CTACGAGAAG
CCCGCGCCGG CCTTCCTCGA CCGGCTGGAG AGCGTCTTCG GCTTGACCGT GCCGCGCGAA
CACGGCTACG ACACCGTCGG CGCCATCGAG GCGATGCGCA ACGGCGCCGC GCGCGTGTTC
TTCGCCATGG GCGGCAACTT CGCGGCGGCC ACGCCGGATA CCGCCGCCAC CTGGGCCGGC
CTGCGCCAGT GCGACCTGAC CGTGCACGTG ACCACCAAGC TCAACCGCAG CCACGTCGTG
CACGGCAAGG CCGCGCTGAT CCTGCCGTGC CTGGGCCGCA CCGAAATCGA CCAGCAGGCC
GGCGGCGCGC AGGGCGTGAC GGTGGAAGAC TCGATGAGCA TGGTGCACAT GTCGGCGGGC
ATCAATCCGC CGGCCTCGCC GCACCTGCTG TCCGAGCCGG CCATCGTGGC GCGCCTGGCC
GAGGCCACGC TGCCCGGGAG CACCGTGCCG TGGCGCTGGC TGGTCGAAGA CTACGACCGC
ATCCGCGAGC GCATCGAAGC GGTGTTCGAT GACTTCGCCG GCTTCAACGA GAAGATCCGC
GTGCCGGGCG GCTTCCGCCT GCGCAACACG GCTTCGGAGC GGATCTGGAA CACGCCCTCG
GGCAAGGCGC TCTTCCACAC GCACGGCATC CCGACCGACA CGCCCGTGCA CCGCGCCCGC
GCGCGCCATG CCGATGCCAC CGTCTTCACG CTGGCCACGG TGCGCTCGCA TGACCAGTAC
AACACCACCA TCTACGGCAT GGACGACCGC TATCGCGGCG TGTTCGGCCA GCGCCGCGTG
GTGTTCGCCA ACACCGAAGA CCTGCGCGCG ATCGGCATGA AGGACGGCGA CTGGGTGGAC
ATGGTCACGC TGTCGGAAGA TGGCGCCACG CGCCGCGCGG ACGGCTTCCG CCTGGTGGCG
TACGACATCC CGCGCGGCTG CCTGGCGGCG TATTACCCCG AAACCAACCC GCTGGTGCCG
CTGTCCGCCG TGGCCGACAA GGCCCGCACG CCGACGTCCA AGTCGATCCC GGTGATGCTG
TTGCCGAGCC AGGCTGCGCC GCGCGCCGAA GCGGACACGG CGGCCACCGC CGAAGCCTGA
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| Protein sequence | MKHQKIEFYR HPAGGWGALK SVAHQLLSQG IAAKGAKTLL SANQPDGFDC PGCAWPDRDH
ASTFEFCENG VKAVAAEATA RRTTPEFFAQ HTVRELAGWS DFALEDQGRL THPMVYDATT
DKYVPIEWDA AFALIAQHLR ALPDPNQAIF YTSGRTSNEA AFLYQLFVRA YGTNNFPDCS
NMCHEPSGTG MRSSIGVGKG TVTLDDFTQA DAIFIFGQNP GTNHPRMLGE LREAAKRGAA
IVSFNPLRER GLERFADPQS KIEMLTLGST RISTEYHQVR IGGDLATVKG LIKHVIERDD
AACSRGEPAI IDHDFVARHT GGYDAFAADV RAESWATIEA ESGLPEAEIR QAGDTYINAG
SVIACWGMGI TQHKHSVATI QMIVNLLLLR GNIGRPGAGA CPVRGHSNVQ GDRTMGIYEK
PAPAFLDRLE SVFGLTVPRE HGYDTVGAIE AMRNGAARVF FAMGGNFAAA TPDTAATWAG
LRQCDLTVHV TTKLNRSHVV HGKAALILPC LGRTEIDQQA GGAQGVTVED SMSMVHMSAG
INPPASPHLL SEPAIVARLA EATLPGSTVP WRWLVEDYDR IRERIEAVFD DFAGFNEKIR
VPGGFRLRNT ASERIWNTPS GKALFHTHGI PTDTPVHRAR ARHADATVFT LATVRSHDQY
NTTIYGMDDR YRGVFGQRRV VFANTEDLRA IGMKDGDWVD MVTLSEDGAT RRADGFRLVA
YDIPRGCLAA YYPETNPLVP LSAVADKART PTSKSIPVML LPSQAAPRAE ADTAATAEA
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