| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02378 |
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| Symbol | RSp1041 |
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| ID | 1223353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1318946 |
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| End bp | 1320094 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240906 |
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| Product | cation transporter transmembrane protein |
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| Protein accession | NP_522602 |
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| Protein GI | 17549262 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.571869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.441465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTCA AATCGATATC CGCCAAGCGA CTCATCACCG GCGCCGGCGT GCTGGCTGCG
ATCAGCGTGG CCGTGTGGGG CACGGTGTCC CTGCATGCCA AGGAGGCCGC TGCGCCGGAG
GCTCCGGTCT CCGTCCGGCA CGAGGGCGAG CGCGTGATCG TGCCCGAGCA GTCGGCGCTG
CGGCGCACGC TGGCGGTGGC GCCGGTCGTC CAGGGCCAGA TTGCCGCGCC CTTCACCCTG
CCGGCGGTGG TCGAGGCGGA TCCGGCCAAG CTGATGAAAG TCCTGCCGCC GCTCACAGGC
CGCATCGTCA GCCTCAACAA GCAGCTCGGC GACGCGGTGA AGGCCGGCGA CGTGCTGTTC
TCGATCGACT CGGCGGACCT GGCGCAGGCC ACGAGCGATG CGGCCAAGGC CCAGTCGACG
CTGGCGCTGA CCCGGCGCAA CCTGGAGCGG CTGCGGGAGC TGGACAAGTC GGAGATCGCC
GCCAAGCGCG ATCTCGAGCA GGCGCAGAAC GACTACGCCC AGGCGGTGAG CGAGGCGGAT
CGCGCGAACA ACCGGCTGGC GCAGCTGGGC GCCAAGGGCG GCACGCAGGT GACGGGCGGC
CACATCCTGG CGGTGCGCTC GCCCATCACC GGGCGCGTCG TCGATCTGAA CGCGGCCATC
GGCGGATACT GGAACGATGC CACGGCGCCG GTCATGACGG TCGCCGATCT TTCCCGCGTG
TTCGTGACGG CGAGCGCGCA GGAGAAGGAC CTGGCCCAGG TCTACGCGGG GCAGTCGGCG
ACGGTCAAGC TCGACGCCTA TGCCGATGCG CTGCCGGCCA AGGTCCGCTT CGTCGGCGAG
ATGCTCGATC CGGATACCCG CACCGTCAAG GTCAGGATGG TGTTCGACAA CCGGGAGGGG
CGGCTCAAGC CCGGCATGTT CGCCCAGGCC ACGTTCCTGG CGCGGCCGCA CGATGGCATC
ACGGTACCCA TGACGGCGGT GATCCAGAGC GGGTTCTACA ACCGCGCCTT TGTCGAGGTG
GCGCCGTGGC AGTTCGAGGC GCGCGTGGTC AAGGTGGGGG CGCAGCTCGA TGATCATGTC
GAAATCGTCT CGGGCCTGAA GGCCGGCGAC CGCGTGGTGG TCAAAGAGGG AGTGCTGCTC
AATGATTGA
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| Protein sequence | MQVKSISAKR LITGAGVLAA ISVAVWGTVS LHAKEAAAPE APVSVRHEGE RVIVPEQSAL
RRTLAVAPVV QGQIAAPFTL PAVVEADPAK LMKVLPPLTG RIVSLNKQLG DAVKAGDVLF
SIDSADLAQA TSDAAKAQST LALTRRNLER LRELDKSEIA AKRDLEQAQN DYAQAVSEAD
RANNRLAQLG AKGGTQVTGG HILAVRSPIT GRVVDLNAAI GGYWNDATAP VMTVADLSRV
FVTASAQEKD LAQVYAGQSA TVKLDAYADA LPAKVRFVGE MLDPDTRTVK VRMVFDNREG
RLKPGMFAQA TFLARPHDGI TVPMTAVIQS GFYNRAFVEV APWQFEARVV KVGAQLDDHV
EIVSGLKAGD RVVVKEGVLL ND
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