| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02084 |
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| Symbol | RSp1374 |
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| ID | 1223686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1729130 |
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| End bp | 1736581 |
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| Gene Length | 7452 bp |
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| Protein Length | 2483 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637241237 |
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| Product | hypothetical protein |
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| Protein accession | NP_522933 |
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| Protein GI | 17549593 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACGTA TTACCCACGC TTCATCGCAC GACTACCCGC GGTCGCATGA CAACCAGGCG
CCCGCATCAT CGACCCACCC CCGCAAGCGC AACCGAGACC CGGCACACGA CGCGTCATCG
TCATTCGATG GCCTGCCGCG CCGCACGGAC AGCCGCCGCC ACCCGGAGCA CGTGCCCGCG
CCCAAGCGCC AGCGCGTATC CGTGGCGGAC CGGCAGGAGA CGGCGAGCCA TGCGAGTGCG
CCGCATCCGC AACACCGAGC GCGAACGACG GCCGAAGCGC CCAGGCGGCA ACGCTCCGAT
CGGGAGCCGC CGGCCCGGCA GGCCAAGCGT GCGCGCCATG ACCGCAGCGA TGCCATCCGG
ACCGAAACCG GACGGGCTCG GACGGCGCCC GCCCCCGCGC AGGCACGCGA TCGGCACGAC
CCGTCCGATG CGCGCCGCCG CGCGCCGGCT GCCGTGCCGC AAAGGCCCAC GCCCGAAGCG
CGAGCGAGCT TCCGGAAGCA GTTCGCCCGC ACGCGGAAGC TGGACGACGA CGAGAGCGAT
CTGCTGTGGA CCATCGCGAG CGATGCCCTT TCGCATCGCG ACTGCGGCAA GGCCCTGCGC
CTGCTGGAAA GGCCCGCGGT CGACTTCATG GACAGCCTGG CCTGCTTCGC CAATTTCGTG
AGGGCGGTCT CGGCGCTGCT GGAGTCTGCC GGCAGGCTCG GGCTGTCCGA ACGCGCCACC
GACCAGCTGA AAAGGAAGTG GGAAGAGTCG TCGCACGCGT TCTATGCCGT TCACCACGAC
ATGGCGATCG ACAACGAACG CTTTGTCAGC AAGCTCGCCA GCCTGTGCAA CCGCTGGTCG
CAAGCGCAGC CCGCGCAGGG TGCCGGCTGC GTGGCGGTGG CGCGGATCCT CGAGAGCCTC
GGCATGCGTT ACGGGCCCGG TCTTCTCCGC AACCGGCTCG CAGACACCAA CCCGCTGCTC
GGACGGGACA TGAGCCTGCT GATCAATGCC TTCAGCAAGT GGCCGGAGGA CGAGGCCTGC
CGGGTGGGCG CGCAACTGCT GGCAGGCGTC GTCGCCGACG AGCAGGACGC GCTGCTCTCG
CCGGTGCAGT ATCAGCCGCA GGCGCTCGCG CGCCTCGTCG GCGGCGTGAG CAAATGGCCG
GATGACAAGA CCTGCCGGCA AGCGGCGGCG GCGATGGCCG GGGCCCTGTG GCAGCGCCGC
CAGGAGCTGG ACAACCCGGA GGCGTTCAAG CCGCAGGAAT TGGCCATGTG CCTCAACGGC
TTGAGCAAGT TCACCGACGC CGCATGCGAG CAGGCGGCCA TGGCCGTGGC CGGCGCCGTA
CTCTCGCGCA AGGCCCAGTT GCTGGATCCC GGGACATGCC CTTCCCAGCA TCTGTCCATG
ATCCTCAACG GCCTGAGCAA GTGGCCGCTG CGGGAGCCGG CACGGCTGGC GGCGGTGGAG
GTGGCGGCGG CGCTGTGGCA TCGCCGCCGG GACATGACCG ACACCGGACA GTTCAACGCC
CAGGACGTGT CCAACTGCCT CAACGGCCTG AGCAAATGGC ATGGCGATGC AACCTGCCGG
CAGGCGGCCG TCGCGCTGGC GGAGGCCCTG CCGCGGCACC GGGACGCGCA CAACGATCTG
CCGGACTTCC TGCCGATGCA CCTGGCGAGC TGCCTCAACG GCTTGAGCAA GTGGCCTGAA
GAGGCGAGCT GCCGGCAGGC AGCGGCAGCC GTGGCCCGGG CGCTGCTGTG GCGCAAGGCC
GATCTGGACG ATGCAGAACG ATTCAGCGCC CAGCACCTGT CCAATTGCCT CCACGGCCTG
AGCAAGTGGC CCGACGAGGA CAGCTGCCGG CAAGCGGCGC TGGCGGTGGC GGACGCACTG
GTGCGGCGCC TGGGCACGCC GGGCGGCGCC GATGCCTTCA CGCCCCAGCA GGTGTCCAAC
TGCATCAACG GCCTGAGCAA GTGGCCGGAA GAACCCGCCT GCAAGCTGGC GGCGGTGGCG
ATGGCCACCG CGCTGTGGCG GCGCCGGGAC GCACTGGACG ATGCCGCGCA ATTCACCGGC
CAGGGCCTGG CCAACTGCCT CCACGGCCTG AGCAAGTGGC CCACGGAAGA CCCCTGCCGG
AAAGCGGCGC TGGCGGTGGT GGGCGCACTG ATGCCGCGCT GGAGCAGCGT GGCGGTTGCC
GGCGATCCAT TCCTGCCCCA GCTCCTGTCC AACTGCCTCA ACGGCCTGAG CAAATGGCCC
GAAGAGGACA GTTGCCGGAA AGCGGCGCTG ACGGTGGCCG AAACCCTGAT GCGGCACCGG
CGCGCGCTGG CCGACCCTCG GCAGTTCACG CCGCAGGAGC TGTCCAACTG CATCAATGGC
CTGAGCAAGT GGCCCGAAGC ACCCGGTTGC CGGGAGGCCG CGCTGGCGGT GGCCGAAGCG
CTGCTGCTAC GCCGGGACGA GCTGGGCGAT ACCGAGGCGT TCGGCGCGAT CGGCCTGGCC
GCCTGCCTCA ACGGCCTGAG CAAGTGGCCC GGAGAGGCGA CCTGCCGGAG GGCCGCGCTG
GCCGTGGCCG AAGCGCTGCT GCTGGGCTGG GACACGCTGG CCGCCGACGG CCAGCTCACG
CCCCAGCGCC TGGCCAACAG CCTGAACGGC GTGAGCCGGT GGCTGCAGGA TGCGGCGAGC
CAGGAGGTGT CCATCCGGAT CATCGGCATG CTTGGCAGCG GCGGGCAGCC GTTCGGCGCC
TTCACCATGG CCCAGCTCGC CCAACTGGCC AACGGCACGG CCCGCTTCAT CCTGGAGCTG
GGGCATGCCG GCGAGGCCGA CGACGGCGAC GCGATCCAGA GCGATGCCTC CATGGCGCTG
GCCCAGGCCC GCCTGCGCGA GCTGGCGGCG CATCTGGACT CGCGCCCCGA CAGGCTGGCG
CAGGCCGAGA CGCGCAACGT GGCGCTGATC CTCAAGGCCC TGGCCAGCAC CGGGCTCAAG
GACGGGCTGC GGCTGCTCGC CCATCAGGGG CTGACGCGCC TGGCCGCGCT CTACGCAGAA
ACCGGATTCA AACCCGACAA CCTGGAGGCG CTGGCCAGCG TGGCGGCCGG GCTGCTGCCG
GTGGCGCGCG CGCCCGAACT CAAGGCCTAT CGCGCGGATG CCCTGCGGCT GCTCGATCAG
ATGCAGCCCG CCGTGGACCG CAAGATACGG CTCTACATCG ATGCCCACCT GGCCGCCGCC
GACCCGCGCC GGCCGGCAGC GGCCGAAGCG CCCCCGTCCC TGCAGATCCG GCGGGACGGC
GAGGCCTTCG GCACCCGCCG CCCCGGCCTG ACCTTCTTCC TGCTGCTCAA GGCCTACTCG
GTGGTGGCGG ATTGCTGGAA GCGCAGCAAC GTGCCGGACA TCCCCTTGCC CGCGCATGCC
CGGCGCGATG CGCTCAGGAC CTGGGTGGCC GAGATGCTGG ACCGCACGCG CGGCGCGATC
GAAACCGACC TCGATGAAAT GAGCTGGAAC CTCATCGCGC AGATCGAGGC CGCAGACCAG
GTGCTCGACG CCGTAGACCT GAAGCTGCAC AAGGATCTCG ACACGATCCT GGCCGCGCAT
CCGCCGACGC CGCTGAACGT GGGCGACGTG CGGCGCGAAC TGCGCGCGCT GCCGGAGGTG
CGCGACATGA TGCACAGCGA TGCGGGCGCG GCGGCGATCG AGGTCATCGA CCTGGCCGGA
CGCAACCTCA CCCCCCATCG GCCCGACGAA ACCCGGGACA CCGCCGCATC CCAGTACGCC
TTCTTCACGC GCCTGACCAG CGGGCGGCTG CCGCTGCTGG AAGTGCAATT GCCCGGCAAG
GTCAGCGCAT TCATGCTGAC GCGCGTCATC CGGCGCGGCG GCGATCTGCT GCGCATGGAC
CTGTTCGGGG GCAGCCACCT GAAGCCGACC AAGGTGCACA TGCGCAGCCT GCTGGGCGCC
TCGGGAACGA AGGGCGGGAT CAAGCGCTAC GGCAGGATTC CCGCCATGCG GCTGGCCGAC
ACCGCGCCCG ATGCCGCGCT GATGAAGGAC GTGATCCGCA AGCTCAATCC GCAGCGCGAA
GACTGGTTCC GGATGCAGCG CGCGCTGCTG GAGGTGGTGC CGCGCGACCA TGTGGTCGAG
GGCCCCATCC GCCTGGCGCT GCTGCCCGAC CGGCTGCCCG GCTCGCCGCC GGCCTTTGCG
CTACGCACGC CCGAAGGGGC CGCCATCCAG CTGGTGCCCA ACGACGGCTG CGGCTTCATC
CGCGAATCCC TGGCGTGCAG GATCCCCGTC ATCCGGCAGG CGATGCACTC CGCGCAGGCG
CTGGAGGGCG AATCGCAGCG GATGTCGCTG CTGCCGCCGC AGGCGACCCA CCATTTCCCG
CGCGACCAGG CAACGATCGA AGAGGCCCGG GCGCACCTGC GCGCGTCGCT GCGCGACGAT
CCGGAGCTCT GGGTGGCCAA TCCCGACGAC GGCACGCGCG ACATCAAGAC ACACAAGCTC
TACGAGGCGC TGGCGGGCGC GCTCATCATG GGCACGCAGG GCATCGCCGT GCCTTCGGGA
GACGACCGGC TGCACCTGCC CAGGGACAAG AGCAAGGTGT TCGATGCCAC GGGCGGCACC
GTGCTCCTGG GCAAGCCCCC TTACGACAAG GCCAACCTCA TGCCGGTCAC GGCCGACCGC
ATCGGCACCT GCGACAACGG CGACGCCACG GCCCGGTTCC TGGACACCGC CTTCGCGTTC
CAGTACAGCT ACACCGCCTG GGACGAGACC GGCAACCCGC CGGCCGCCGC CGACGACGTC
CCGATGCTGC ACGGCAAGGG CGTGACCATC GTGGTGCCCG ACAAGATGTG GCCCCAGGAC
AACGACGCGC AATGGGTCTG GTCGACGGAA GACATGAAGG TGCATTCGAG CTGGACGGAC
GGCCGCCGCC GCGACCGGCT TGCACCGCGC ATGGACACCG TGGGCAGCCT GCGCGTCAAG
GAGATCTTCC CGCCCGGCGC CCTGATGGCC CTGCCGATCA ACGAGCTCAA GAAGCGCGAT
GCCGATTGCG ACGGCGACAA GGTGTTCCTG TACGCGGGCC TGCCGCGGAT GACGCAGGCC
GTAACCCGGT TCTTCGAGGA GCGCGAGCGG CGCATCGGCA AGCTCGGCTC GTTCAAACCG
CCGAAGACGG CCCACGGCGT GCTGGATGCC GAGGGCCGCT ATCAGGCCGG GCGTGCCGCC
GAGGTGCTGT CGGCGCTGCA CGGGCAGGAG CTGGTCGGCC GCCTCAGCAC GTTGCAGTTC
CTGTTCTTCG GCCAGCCTCC GGCGCTGCAG CAAACCTTGG CCGAGCGGAC GCTGTTCGGC
GTCTATGAGG GCACCGAGCG CGAGCTGCGG CGCGGCGTTC GCGCGCTGCT GCGCGGCGAG
CGGGCGACCA CGCCGCAGGT CATGGAGGAC TTGCTGCTCC GCGCGGGCCT GGGCGTCCAG
CATGCCTGCC ATCCGGTGGC GCTCGAAGTG GCGCGGGCGC TGGAGGCGCA ACTCCTGGAG
GTCATGCGCG AGGCGCAGCC CCCCGTGCGC GCCGTGTCGC CCGACACGGC GTCACGAGCG
CCCCAGGCCC TGTCCGGCGG GTCGACCCTG CTGTTTGCTC CGCTCACACA GGCCTATGAA
TCAGCCACGA CGCCGCGCGA GCGCCTCGCG GCCCTGGTGA CGCACTACCC CCGGGCCCGC
CTGCCGCACC CGGCCACGAT CCTGCCCACC ACGCCCCCCA AGCAACCGGA CCCACTGGCC
CAGCCGGCCC CGCTGGACGA CGCGCCCATC GGGCAGTCCG GCTACGTACC GGGCGCGCCC
CTGGAAACCC TGCACAACCT GCTCACGCTC GGCGTGAAAA TCGGCACCGA CGCCCCCAAG
GCCGTGACGC AGACCGATCT GTTCCTCGAC ATCGCCGATC ATCTCGAGGG AACGCTGCGC
AGCAGCCCCG AGCGCATCCG GTTCATGCCG TACACCAGGA GCGGCGTGAT GCAGGAGCTG
AGTCAGGGGC GCTTCAACGC GCAGGCCACT CTGCAGCGGC TGCGCGACAA CCCCACCCTC
GCGGCCGGAC TCATGGAGAT GGCGATCGAG GAGCTGCTCG CGCACGGTGC GATCGAGGGC
ACGCCGCCCT TGCGCACCAC GCCCGCGGAA ACCGAAGCCC AACTCCGGCA TTGCGCCCGC
ACGCTGCACG CGGCGGCCCG CCTGGTCGAG CCGGAGATCA CGCCGGTCAT CAAAGCGGCC
ATCGAAGGCA TCGGCGCCCT GCGCGGCCAG GCGCACCGCG TCAAGACGGA GCGCGCCCTG
CACGACAAGC TGCGCGTGCT GCTGCACAGG GGCCACCCGA GCCCCGCAGA CGCGGCGGCC
ATGGTGAACG ACGCGCTGCG CTATAGCGTC GTGCTCAAGC CCGACGACTT CGCCGCGGGG
TATGCCGAGG TCCTGGGCAA CCTCGACCGC GCCGGCCTGA TCAAGACGCG CGTGCACAAC
GCCTTCAAAC CCGCCTGGGA CCCGTTCAAG GGCATCAACG TGAAATTCAT GGGCCGCGAC
GCCGCGGGCC AGAGCGTGCG CCTCGAAGTG CAGTTCCATA CCGACGAGAC CTTCGCGCTC
AAGATGCGCT ACCACGACAA CTACAAGCAG GATTTCGAGC TGCAGATGCA GGGCGCCAGC
GTCGAGCAGC GGGTTGCCTG CCTGGAGGAG GCCCGACAGG CCTGCAGACA AGTCGCCACG
CCGGCGGGCT GCGAACACAT CGGCGACTGG AACAACGAGC CCCCGCAGGT GAACAAGCGG
CGCGCGCAGG CCAAGGCGGC GCAGTTGCCG GGCGCCGGCG CCGGGAAGCG CCCCGACGCC
ATGGCAACGC AGGTCGAACG GCTGCTACAG GCAGCGGTCC GCATCGAGCG CGAGGTGGGG
CCACTGCTTC AGACGATGCA GTTGCACGTG ATCCGGGAGC ACAGCGTCGT GAAGAAAGCG
AAGTCCATCG AAAAGAAAAT CCAGCGCCTG TGCGTCCTGA ACGGCATCAC GCCGGAGCAG
GCGGCCGACC GCGTGCGCGA CGCGATGCGC TGGATCATCC AGCTGCCCCA CGAGACATTC
GGCGCGCACG CCCAGAAGGC GCTGGAGACG CTGACGGCCA ACGGCCTGCG GATCACGCGC
GTGAACAACA GCTTTATGGC CAGAAACCGC ACCTATGCCG GATTGAACGT GAAGCTGCAG
ACCCGCGAGG CGCTGAACTT CGAAATCCAG TTCCACACGG GCGACAGCCT CTACACCAGG
AACAAGACGC ACAAGATCTA CCGGCAATGG CAGGACACGG ACGTGGAACA GCGACAAGCC
ACCGACCCGG CCCAGCGGCA GGCACTGCAA AAGGCCAATG CCGACCGGCT CGCGGCGCTC
AAGACCTATG CTGCCACCGT GCCGACGCCC ATCGGCGCGG AGCGCATTCC GTCATTCGAC
CGCTACCGGC GGGACGGCGC GTCGGCAAGC GATCGGGCTC GGGCCGAGCG CACCGCAGCG
CCAGAATCGT AG
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| Protein sequence | MTRITHASSH DYPRSHDNQA PASSTHPRKR NRDPAHDASS SFDGLPRRTD SRRHPEHVPA
PKRQRVSVAD RQETASHASA PHPQHRARTT AEAPRRQRSD REPPARQAKR ARHDRSDAIR
TETGRARTAP APAQARDRHD PSDARRRAPA AVPQRPTPEA RASFRKQFAR TRKLDDDESD
LLWTIASDAL SHRDCGKALR LLERPAVDFM DSLACFANFV RAVSALLESA GRLGLSERAT
DQLKRKWEES SHAFYAVHHD MAIDNERFVS KLASLCNRWS QAQPAQGAGC VAVARILESL
GMRYGPGLLR NRLADTNPLL GRDMSLLINA FSKWPEDEAC RVGAQLLAGV VADEQDALLS
PVQYQPQALA RLVGGVSKWP DDKTCRQAAA AMAGALWQRR QELDNPEAFK PQELAMCLNG
LSKFTDAACE QAAMAVAGAV LSRKAQLLDP GTCPSQHLSM ILNGLSKWPL REPARLAAVE
VAAALWHRRR DMTDTGQFNA QDVSNCLNGL SKWHGDATCR QAAVALAEAL PRHRDAHNDL
PDFLPMHLAS CLNGLSKWPE EASCRQAAAA VARALLWRKA DLDDAERFSA QHLSNCLHGL
SKWPDEDSCR QAALAVADAL VRRLGTPGGA DAFTPQQVSN CINGLSKWPE EPACKLAAVA
MATALWRRRD ALDDAAQFTG QGLANCLHGL SKWPTEDPCR KAALAVVGAL MPRWSSVAVA
GDPFLPQLLS NCLNGLSKWP EEDSCRKAAL TVAETLMRHR RALADPRQFT PQELSNCING
LSKWPEAPGC REAALAVAEA LLLRRDELGD TEAFGAIGLA ACLNGLSKWP GEATCRRAAL
AVAEALLLGW DTLAADGQLT PQRLANSLNG VSRWLQDAAS QEVSIRIIGM LGSGGQPFGA
FTMAQLAQLA NGTARFILEL GHAGEADDGD AIQSDASMAL AQARLRELAA HLDSRPDRLA
QAETRNVALI LKALASTGLK DGLRLLAHQG LTRLAALYAE TGFKPDNLEA LASVAAGLLP
VARAPELKAY RADALRLLDQ MQPAVDRKIR LYIDAHLAAA DPRRPAAAEA PPSLQIRRDG
EAFGTRRPGL TFFLLLKAYS VVADCWKRSN VPDIPLPAHA RRDALRTWVA EMLDRTRGAI
ETDLDEMSWN LIAQIEAADQ VLDAVDLKLH KDLDTILAAH PPTPLNVGDV RRELRALPEV
RDMMHSDAGA AAIEVIDLAG RNLTPHRPDE TRDTAASQYA FFTRLTSGRL PLLEVQLPGK
VSAFMLTRVI RRGGDLLRMD LFGGSHLKPT KVHMRSLLGA SGTKGGIKRY GRIPAMRLAD
TAPDAALMKD VIRKLNPQRE DWFRMQRALL EVVPRDHVVE GPIRLALLPD RLPGSPPAFA
LRTPEGAAIQ LVPNDGCGFI RESLACRIPV IRQAMHSAQA LEGESQRMSL LPPQATHHFP
RDQATIEEAR AHLRASLRDD PELWVANPDD GTRDIKTHKL YEALAGALIM GTQGIAVPSG
DDRLHLPRDK SKVFDATGGT VLLGKPPYDK ANLMPVTADR IGTCDNGDAT ARFLDTAFAF
QYSYTAWDET GNPPAAADDV PMLHGKGVTI VVPDKMWPQD NDAQWVWSTE DMKVHSSWTD
GRRRDRLAPR MDTVGSLRVK EIFPPGALMA LPINELKKRD ADCDGDKVFL YAGLPRMTQA
VTRFFEERER RIGKLGSFKP PKTAHGVLDA EGRYQAGRAA EVLSALHGQE LVGRLSTLQF
LFFGQPPALQ QTLAERTLFG VYEGTERELR RGVRALLRGE RATTPQVMED LLLRAGLGVQ
HACHPVALEV ARALEAQLLE VMREAQPPVR AVSPDTASRA PQALSGGSTL LFAPLTQAYE
SATTPRERLA ALVTHYPRAR LPHPATILPT TPPKQPDPLA QPAPLDDAPI GQSGYVPGAP
LETLHNLLTL GVKIGTDAPK AVTQTDLFLD IADHLEGTLR SSPERIRFMP YTRSGVMQEL
SQGRFNAQAT LQRLRDNPTL AAGLMEMAIE ELLAHGAIEG TPPLRTTPAE TEAQLRHCAR
TLHAAARLVE PEITPVIKAA IEGIGALRGQ AHRVKTERAL HDKLRVLLHR GHPSPADAAA
MVNDALRYSV VLKPDDFAAG YAEVLGNLDR AGLIKTRVHN AFKPAWDPFK GINVKFMGRD
AAGQSVRLEV QFHTDETFAL KMRYHDNYKQ DFELQMQGAS VEQRVACLEE ARQACRQVAT
PAGCEHIGDW NNEPPQVNKR RAQAKAAQLP GAGAGKRPDA MATQVERLLQ AAVRIEREVG
PLLQTMQLHV IREHSVVKKA KSIEKKIQRL CVLNGITPEQ AADRVRDAMR WIIQLPHETF
GAHAQKALET LTANGLRITR VNNSFMARNR TYAGLNVKLQ TREALNFEIQ FHTGDSLYTR
NKTHKIYRQW QDTDVEQRQA TDPAQRQALQ KANADRLAAL KTYAATVPTP IGAERIPSFD
RYRRDGASAS DRARAERTAA PES
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