| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02029 |
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| Symbol | RSp0054 |
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| ID | 1222602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 60513 |
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| End bp | 61544 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637239913 |
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| Product | transcriptional regulator transcription regulator protein |
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| Protein accession | NP_521615 |
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| Protein GI | 17548275 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.130887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCG ACCGAACTGC GTCGCTGCAG CATTTCGCGT TCATGCCGCT ACCCAACTTC
ACGATGATCG CGTTCACCAA CGCCATCGAA GTGCTGCGCA TGGCGAACTA TCTCAGTGGC
CAAGAGCTGT ACCGGTGGTC CATCGTCAGC CCGGAGGGCG GGCCCGTAAT GGCCAGTAAC
GGATTGGTGA TCGACACGCA GTCCGTGGGC GCCATCGATC GGCCGGACAT CGTCTTCGTC
TGTGGTGGTA TCGATGTTCA GCGCGCAACA ACCACCGAGC ATCTCTCCAC ACTGCGGCGC
GCCGCACGTG ATGGCATCGT TCTCGGGAGC CTGTGTACCG GCACGTATGC GCTTGCCCGG
TCGGGGCTGC TGTCCGGCTA TGCGTGCGCC ATCCATTGGG AAAACATGTC GGCGCTCAAA
GAGGAGTTTC CCGAGACGCG CTTCCTCAAG GAACTGTTTG TGATTGATCG GGACCGCATC
ACGTGCACCG GTGGCGTGGC ACCGCTCGAC ATGATGCTGA ACCTGATCGC CAAACGCGTG
GGCACGGCGC GGGTCACACA GATTGCCGAG CAGTTCATTG TCGAGCACGT GCGGGATACG
GGCGCACAGC AGAAGATGCC GCTGGTGGCT CGGCTCGGCT CGGCCAATAA GTCGCTGTTC
GAAGTCATCT CGCTGATGGA GAACAACATC GAGGAGCCGC TCTCGCGCGA AGAGCTGGCA
CGGCTGGCAA GCATGTCGCA ACGCCAATTG CAGCGGCTGT TTCGCGACCA TCTCGGGATG
ACCCCGACGC ACTACTACCT CACGCTGCGC CTGCGCCGCG CGCGGGAACT GCTGCTGCAG
ACGGACATGT CCATCATGCA CATCACGATG GCGTGCGGCT TTCAGTCGGC CTGCCATTTC
AGCAAGAGCT ACCGCGACGC ATTTGGTGTC GCGCCCACGC GCGAGCGCAG GGCACAGGCG
GCACCATTGG CCCGCCCCGC GGCTCCAAGC GGAGCATCTG CATTCTCGTC TTCGGCGATG
TACGCCGCTT AG
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| Protein sequence | MSSDRTASLQ HFAFMPLPNF TMIAFTNAIE VLRMANYLSG QELYRWSIVS PEGGPVMASN
GLVIDTQSVG AIDRPDIVFV CGGIDVQRAT TTEHLSTLRR AARDGIVLGS LCTGTYALAR
SGLLSGYACA IHWENMSALK EEFPETRFLK ELFVIDRDRI TCTGGVAPLD MMLNLIAKRV
GTARVTQIAE QFIVEHVRDT GAQQKMPLVA RLGSANKSLF EVISLMENNI EEPLSREELA
RLASMSQRQL QRLFRDHLGM TPTHYYLTLR LRRARELLLQ TDMSIMHITM ACGFQSACHF
SKSYRDAFGV APTRERRAQA APLARPAAPS GASAFSSSAM YAA
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