| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01945 |
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| Symbol | RSp0763 |
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| ID | 1223070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 961125 |
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| End bp | 965066 |
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| Gene Length | 3942 bp |
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| Protein Length | 1313 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240623 |
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| Product | hypothetical protein |
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| Protein accession | NP_522324 |
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| Protein GI | 17548984 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.206649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGCT TCCTCAACTT CCTGACCCAC TCACGCACGC TCTCGGTTCT GGGCGTGCTC
GCGCTGACGA TCATCCTGCT GCTGATCGCG CTGACCTTCG AGATTGGCCT GGTCTGGGCC
GGCATCGCGC TCGGCGTGCT GCTGGCGCTG TGGCTGGCGA CGGCGCTCTG GAAACGCTGG
CGCGCGCGCC GGGCGAGCGC CAGGCTCGAA GGCATGCTGG AGCAGGCCGC CGACAAGAGC
GCCGCGCCGG ACAAGCGCGA GGAAGTCGAG GCGCTGCGCG TGCGCCTGGC CGAGGCAGTC
AAGACCATCA AGCGCTCCAA GCTCGGGCAG CTGTCGGGCG ATGCGGCCCT CTATGAGCTG
CCCTGGTACA TCGTGATCGG CAACCCGGCG GCCGGCAAGA GCACGGCGGT GCTGAACTCG
GGCCTGCAGT TTCCGTTCGC CGACAAGGGC GGCGCGGTGA TCCAGGGCAT CGGCGGCACG
CGCAACTGCG ACTGGTTCTT CACCACCGAA GGCATCCTGC TCGACACGGC CGGCCGCTAC
TCGGTGCACG AGGAAGACCG CCGCGAATGG CTCGGCTTCC TCGACCTGCT CAAGCGCTAC
CGCCCCAAGG CGCCGATCAA CGGCATCGTC GTGACGGTGA GCGTGTCGGA GCTCACGCAG
AACCGTCCCG AGTTCGCCAT CAACCTCGCC AAGAACCTGC GCCAGCGCGT GCAGGAGTTG
ACCGAGCGGC TGGAAGTGTT CGCCCCGGTC TACGTGATGT TCACCAAGGC CGACCTGATC
ACCGGCTTCA CGGAATTCTT CGGCGACAGC GAGAAGCAGG AGCGCGACCG CGTGTGGGGC
GCCTCCCTGC CCTTCGAGCC GGACGCCAAG CCCGACGTGG CAGCGCTGTT CGACCAGCGC
TTCGATGAGC TGTGCGACGG TCTGAAGGAG ATCAGCGTGG CGCAGATCTC GCTGCACCAG
AAGAACAAGC TGTCGCCGGG GCTGCTGAGC TTTCCGCTGG AGTTCGCCTC GATCAAGCCG
GCGCTGCGCG CCTTCCTGGT GACGCTGTTC GACGAGAACC CCTTCCAGTA CAAGCCGGTG
TTCCGCGGCT TCTACTTCAC CAGCGCGCTG CAGGAAGGCG CCACCAACAG CGCCTCGGCC
GAGCGCATCG CGCGCCGCTT CGGGCTCAGC ACGGACGGCG CCGCGCGCAG CCGCGAGGTG
TTCTCCAAGA ACGGCTTCTT CCTGCGCGAC CTGTTCTCCA AGGTCATCTT CTCCGACCGC
CAGACCGTGC GGCAATTCGC CAGCCCGGCC AAGACGCGCC TGCGCATCGC CACCTTCTTC
GGGCTGGTGC TGGCGTTGGG CCTGCTGCTG GGCGGCTGGA CGTGGTCGTA CATGGGCAAC
CGCACGCTGA CCGCCAACGT GCAGGCCGAC CTCGACAAGA TCGTCAAGCT GCAGCAGAAC
CGCGTCGACC TGCAAGCCCG GCTGGAAGCG CTGGACATCC TGCAGGACCG CATCGAGCAG
CTCGAGCGCT TCCGCGGCGA GCATCCGCTG GCGCTGTCGC TGGGGCTATA CCAGGGCGAC
GCGCTGCAGC ACAAGCTGCT CGACGAGTAC TACAACGGCC TGCGCCAGGT GATGCTCAAG
CCGGTGGGCG GCGCGCTCGA GACCTTCCTG GCCGAGGTCA ACACGCACCC CGAGCAGCTC
GCGCCGATGG TGCGTCCGCC CGAGACCGGC GCGGTGATCG CCACCTCCGT CACCTCGGCG
ACGGCCACCA TCGCGGCTTC GGGCGCCGCC GCCGGTGCGC CGGCATCGGC ATCGCCCACG
GCCACCGCCA CGGCCGCCGC GCCGGCCGGC AAGCGCTTCA CCGATGCCTC GCCCTCCAAC
GTGGAAGACG GCTACAACGC GCTCAAGACC TACCTGATGC TGTCGGACAA GCGCCACGTG
GAAGTCGCGC ACCTGACCGA CCAGATCACG CGCTTCTGGC GCGGCTGGCT GGAAGACAAC
CGGGGCAACA TGCCGCGCGA GCAGATGATC CGCTCGGCCG AGCGCAACCT GTCGTTCTTC
CTGGCCCGCG TGAATGACGA CAACTGGCCG CTGCTGGAAG GCAACCTGTC GCTGATCGAC
CAGACCCGCG AGAACCTGCG CCGCGTGGTG CGCGGCATGC CGGCGCGCGA ACGCGCCTAC
GCCGAGATCA AGGCCCGCGC CTCGACCCGC TATGCGCCGA TGACGGTCGC GCGCATCGTC
GGCGAGACCG GCGGCAACGT GATCGCCGGC AGCTACGCCG TGCCCGGCAC CTTCACCAAG
GAGGCATGGC AGGGCTACGT GCAGCCCGCC ATCCGCGAGG CCGCCAGCAA GGAGCTGCAG
ACCAAGGACT GGGTGCTCAA CGTGGCCGCC CGCGACGACC TGACGCTCGA AGGCAGCCCC
GAGCAGATCC AGAAGACCCT GGTCACGATG TACAAGACCG AGTACGCCCG CGAGTGGCAA
CGCTTCATGC AGGGCGTGGC CGTGCAGGAC TTCACCAGCT TCGAGCAGGC CGTGGCCGGC
ATGAACCTGC TGGGCGATCC GACCAACTCG CCGATCCGCA AGGTGCTCGA CACCGCCTAC
GACCAGACCT CGTGGGACAA CCCGTCCATG CTCAACGCCG GCCTCAAGCA GGCCAAGTCG
GGCGTGCTGG GCTGGTTCAA GCAGCTCTTC GCGCGGCAGA CGCCGTCGCA GATCAACGTC
AACGTGGACG TGGGCGGCAA CACCGAGACC GGCAGCATCC CGATGGGGCC GGTGGGCAAG
GAGTTCGCCG GGCTGGCGCG CGTGGCGGTG ATGCACGACG ACAAATCGCT GCTGCGCGGC
TACATGGACG CGCTGTCCAA GGTCCGCACC CGCTTCAACC TCATCAAGAA CCAGGGCGAC
CCCGGCCCCG GCGCGCGCCA GCTGATGCAG CAGACGCTGG ACGGCAACGG CTCCGAGCTG
GCCGACACCC TCAAGTACGT CGATGAGCAG ATGCTGACCG GCATGACCGA CAGCGAACGT
CAGACGCTGC GCCCGCTGCT GGTGCGCCCG CTGCTGCAGT CGTATGCGGT GGTGATCCGG
CCGGCCAGCG TGGAGATCAA CAAGGTGTGG AACGCGCAGG TCTACCAGCC GTTCAGCCAG
ACGCTGGCCG AGAAGTATCC GTTTGCCGCC AACGCCAAGA TCGAGGCCAG CGCGGCCGAG
ATCGGCCAGA TCTTCGGGCC GGAGGGCGCC ATCGCCAAGT TCGCCAACAC GACCATCGGC
CCGCTGTCGG TGCGCCGCGG CGACATGCTG GCGGCCCGCA CCTGGGGTGA CCTGGGCCTG
GCCTTCGTGC CCGAGTTCAC CGCCGGCTTC ACGCGCTGGA TCGCCCCGCT GACGGGCGGT
GCGGCGGGCG GCGCCGGTGG CGCGGCGGCC GCGGCGCCGC AGACGGTGTT CCAGATTCTG
CCGGTGCCGT CGCAGGGCAC CACCGAATAC ACCATCGAGA TCGACGGCCA GCAACTGCGC
TACCGCAACA CGCCGCCGCA ATGGGCCAAC TTCGTCTGGC CGAATCCGCA GGGCGCGCCG
GGCGCGCGCG TGACGGCCAC GACCTTCGAC GGCCGCACCG TGGAGCTGCT CAACGAACCG
GGCCGCTTCG GCCTGGAGCG CCTGATCGCC ACCGCGAACC GCAAGCGTCG CCCCGATGGC
GCGTTCGACC TGACGTGGGC GCGCGGCGAC ATCAGCGTGT CGGTCAGCCT GCGCATCATC
AGCAGCCCGC AGACGGCCGG CACCTCGGGC TCCGACTCGC CGCAAGGCCA GGGCCTGCGC
GGCCTGCGCC TGCCGACCTC GATCGCGGAC GCGACCGCCT CGCAGAACAC CGCCACGCCG
CCCGCGCCGG CAGGCAGCCG CCCGGCCAGC GCGGCCGCCG CGACGACCCA GGCCACCGCC
CGGACCCTCG TCACACAAGA GCAAGGGGGG ACGGCGCAAT GA
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| Protein sequence | MRRFLNFLTH SRTLSVLGVL ALTIILLLIA LTFEIGLVWA GIALGVLLAL WLATALWKRW
RARRASARLE GMLEQAADKS AAPDKREEVE ALRVRLAEAV KTIKRSKLGQ LSGDAALYEL
PWYIVIGNPA AGKSTAVLNS GLQFPFADKG GAVIQGIGGT RNCDWFFTTE GILLDTAGRY
SVHEEDRREW LGFLDLLKRY RPKAPINGIV VTVSVSELTQ NRPEFAINLA KNLRQRVQEL
TERLEVFAPV YVMFTKADLI TGFTEFFGDS EKQERDRVWG ASLPFEPDAK PDVAALFDQR
FDELCDGLKE ISVAQISLHQ KNKLSPGLLS FPLEFASIKP ALRAFLVTLF DENPFQYKPV
FRGFYFTSAL QEGATNSASA ERIARRFGLS TDGAARSREV FSKNGFFLRD LFSKVIFSDR
QTVRQFASPA KTRLRIATFF GLVLALGLLL GGWTWSYMGN RTLTANVQAD LDKIVKLQQN
RVDLQARLEA LDILQDRIEQ LERFRGEHPL ALSLGLYQGD ALQHKLLDEY YNGLRQVMLK
PVGGALETFL AEVNTHPEQL APMVRPPETG AVIATSVTSA TATIAASGAA AGAPASASPT
ATATAAAPAG KRFTDASPSN VEDGYNALKT YLMLSDKRHV EVAHLTDQIT RFWRGWLEDN
RGNMPREQMI RSAERNLSFF LARVNDDNWP LLEGNLSLID QTRENLRRVV RGMPARERAY
AEIKARASTR YAPMTVARIV GETGGNVIAG SYAVPGTFTK EAWQGYVQPA IREAASKELQ
TKDWVLNVAA RDDLTLEGSP EQIQKTLVTM YKTEYAREWQ RFMQGVAVQD FTSFEQAVAG
MNLLGDPTNS PIRKVLDTAY DQTSWDNPSM LNAGLKQAKS GVLGWFKQLF ARQTPSQINV
NVDVGGNTET GSIPMGPVGK EFAGLARVAV MHDDKSLLRG YMDALSKVRT RFNLIKNQGD
PGPGARQLMQ QTLDGNGSEL ADTLKYVDEQ MLTGMTDSER QTLRPLLVRP LLQSYAVVIR
PASVEINKVW NAQVYQPFSQ TLAEKYPFAA NAKIEASAAE IGQIFGPEGA IAKFANTTIG
PLSVRRGDML AARTWGDLGL AFVPEFTAGF TRWIAPLTGG AAGGAGGAAA AAPQTVFQIL
PVPSQGTTEY TIEIDGQQLR YRNTPPQWAN FVWPNPQGAP GARVTATTFD GRTVELLNEP
GRFGLERLIA TANRKRRPDG AFDLTWARGD ISVSVSLRII SSPQTAGTSG SDSPQGQGLR
GLRLPTSIAD ATASQNTATP PAPAGSRPAS AAAATTQATA RTLVTQEQGG TAQ
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