Gene RS01750 details

Gene Information

• Locus tag: RS01750
• Symbol: prfH
• ID: 1223006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: -
• Start bp: 887601
• End bp: 888224
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637240559
• Product: peptide chain release factor-like protein
• Protein accession: NP_522260
• Protein GI: 17548920
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR03072] putative peptide chain release factor H

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.132154
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.46874
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCCTGC TGCAATTCTC TTCCGCGCAA GGGCCGGCCG AATGCGAACT GGCTGTGCTC 
AAGGGGCTGG CTTGCCTGCA ACGCGAATCG GCGCTGGCCG GCGTGCGGGT CGAAGTGCTC 
GAACAGGAGG ACGGCGAACA CCCCGGCACG CTGCGCTCCG CGCTGGTCAG CCTGGAGGGC 
GATGCCGAGG CGGCCGTGGC GCAACGGTGG GAGGGCACGA TCCAGTGGAC CTGCCCCAGC 
CCCTATCGCC CGCGCCACGC ACGCAAGAAC TGGTTCTTCG GCGTGGCACG CTGCGCCGCG 
CCCGCGGCCA CCCTGCCGAG CGAAATCCGG TTCGAGACGG CCCGCGCATC CGGCCCGGGC 
GGGCAGCACG TCAACAAGAC AGAATCGGCA GTGCGAGCCA TCCACCTGGC CACCGGCATC 
AGCGTCAAGG TGCAGACCGA GCGCAGCCAG CACGCCAACA AGCGCCTGGC TGTCCTGCTG 
CTGGCGCACA AGCTGGCGAG CCATGACGCA GCGGCCAGCG CCGCGCAGCG CGCCCACCGG 
CGCACGCTCC ACCATCAGGT GGCGCGGGGC AACCCGCGGC GCGTGTTCAA GGGCGAGCGG 
TTCGAGCCGG CCGGGGGCGA TTAG 

 

Protein sequence

MILLQFSSAQ GPAECELAVL KGLACLQRES ALAGVRVEVL EQEDGEHPGT LRSALVSLEG 
DAEAAVAQRW EGTIQWTCPS PYRPRHARKN WFFGVARCAA PAATLPSEIR FETARASGPG 
GQHVNKTESA VRAIHLATGI SVKVQTERSQ HANKRLAVLL LAHKLASHDA AASAAQRAHR 
RTLHHQVARG NPRRVFKGER FEPAGGD