Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01731 |
Symbol | RSp0718 |
ID | 1223025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 905466 |
End bp | 906830 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637240578 |
Product | lipoprotein |
Protein accession | NP_522279 |
Protein GI | 17548939 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTCG CATGGCGCAT CGCGGGAGGG CTCGCTTGCG CGGCCATGGT CAGCGCATGC GGCGGGGGCG GGGACAGCGG TGGTTCCGGC AGCACCGCGG CGGCGGCGGC CCTGTCGCCG ATGGCGCAGG TCGGCAAGGC GATCTTCTTC GACCCGGCGC TGTCGGCCTC GGGCAAGCAA TCGTGCGCGT CGTGCCATGA TCCGGCGCGC GCCTTCACCG ACCCGAACAA CCTGGCCGTG TCGATCGGCG GGCCGAATGC CGACCTGCCC GGGCTGCGCA ACGCGCCGTC GCTGAACTAC GCTTCGTTCA CCCCGAACTT CCAGGTTGAC GGCACCGGCA CGGCCTCCGG CGGCTTCTTC CGCGACGGCC GCTCGCCGTC GTTGATGGAC CAGGCGCAGC AGCCGTTCAC CAACGCATTC GAGATGGCCA ATGGCTCGGC GGACGACGTG CTCAAGTCGC TGCTGACGCG GCCGTACCTC GATCAGCTCA CGGCCGTGTT CACCAAGGCG GGCATCCAGG ACAGCGCAAC GGCGATGCAG AGCATCGGTC GCGCACTGGC CGCCTACCAG GCCGAAGACC CGGGCTTCCA CACCTTCGAC AGCAAGTACG ACGCATACCT GGCCGGCAAG GCAACGCTCA CGGATTCGGA GATGCGCGGC CTGCTGCTGT TCAACAACCC GACCAAGGGC AACTGCAACG CGTGCCATGT CTCGTCGCGC ACCGGCGGCA CGCCCGCGCT GTTTACCGAC TTCACGTACG ACAACGTCGG CATTCCGCGC AACTGGAGCC TCGCCGCCAA CCAAGAAGGC ACCACGCTGC CCTACGTGCC GAAGAACGGC CTGGCGCTCG GCGCCCCCAA CTACAGCTAC TACGACCTCG GCCTCTGCGG CCCGCTGCGC ACCGACTTCC GCGTGGGCGG CGCGACGTGC GGCCAGTTCA AGGTGCCGAC GCTGCGCAAC ATCGCGCGCA CGCCGCCGTA TTTCCACAAC GGCGTGTTCC AGACGCTGGA CCAGGTGGTG GCCTGGTACG TCACGCGCGA TACCGACCCG GGGCGCTGGT ACGTCAAGGC CGACGGCACA CCCGACGTGC CGTACAACGA CCTGCCGGTC GCCTTCGACG CCAACGTGAA CGTGTCGGAA GTGCCGTACA ACCCGGCCGC CGCCCCGTCG ATGACGAGCC AGGAGATCAG CGACGTGGTG CATTTCCTGT GCGCGCTGAC CGACGGGTTC GACCCGGCCA ATCCGTCCGC CTACAGCGTG CCGGCGCAGT GCCAGTCGTC GACGGCCGAC AGCGTGGCGG CCGCGCGCAT CCAATCCGTC CCGGCGGCCG GAGCCACGGC CGCCAAGGCG AGCCCATCCA GATAA
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Protein sequence | MRVAWRIAGG LACAAMVSAC GGGGDSGGSG STAAAAALSP MAQVGKAIFF DPALSASGKQ SCASCHDPAR AFTDPNNLAV SIGGPNADLP GLRNAPSLNY ASFTPNFQVD GTGTASGGFF RDGRSPSLMD QAQQPFTNAF EMANGSADDV LKSLLTRPYL DQLTAVFTKA GIQDSATAMQ SIGRALAAYQ AEDPGFHTFD SKYDAYLAGK ATLTDSEMRG LLLFNNPTKG NCNACHVSSR TGGTPALFTD FTYDNVGIPR NWSLAANQEG TTLPYVPKNG LALGAPNYSY YDLGLCGPLR TDFRVGGATC GQFKVPTLRN IARTPPYFHN GVFQTLDQVV AWYVTRDTDP GRWYVKADGT PDVPYNDLPV AFDANVNVSE VPYNPAAAPS MTSQEISDVV HFLCALTDGF DPANPSAYSV PAQCQSSTAD SVAAARIQSV PAAGATAAKA SPSR
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