| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00346 |
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| Symbol | RSp0468 |
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| ID | 1222775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 584868 |
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| End bp | 585302 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240328 |
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| Product | general secretion pathway GSPG-like transmembrane protein |
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| Protein accession | NP_522029 |
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| Protein GI | 17548689 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.887338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGTAT CGTCGAAACT GAACAGGATG CAGGAAGCCC GCGGCTTTAC CCTGCTTGAG
CTGCTTGTCG TGGTCGCCAT CATCGGCCTG CTGGCCGCCT ATGTCGGGCC GCGCTACTTT
GCGCAACTGG GCAAGTCGGA AGTGGGCGTG GCCAAGGCAC AGCTCCAGGC GTTCGAGAAG
GCCGTCGACC AGTACCGGCT CGACACGGGG CATTTCCCCA CGACCGAACA GGGCCTCAAG
GCGCTGACCA GCGCGCCCAC GGGCGAAACG CGCTGGGGCG GCCCCTACCT GAAGAAGGAC
GTACCGCTCG ATCCGTGGGG CCACGCCTAC GAATACCGGC AGCCCGGCGC CAACGGCCGC
GAGTACGACA TCGTCTCTTA CGGTCGCGAC GGCGCGGCCG GCGGCGAAGG CGAGAACGCC
GATCTGACGA ACTGA
|
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| Protein sequence | MTVSSKLNRM QEARGFTLLE LLVVVAIIGL LAAYVGPRYF AQLGKSEVGV AKAQLQAFEK
AVDQYRLDTG HFPTTEQGLK ALTSAPTGET RWGGPYLKKD VPLDPWGHAY EYRQPGANGR
EYDIVSYGRD GAAGGEGENA DLTN
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