Gene RPD_4419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4419 
Symbol 
ID4024944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4890259 
End bp4890906 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID637964628 
Productmethionine sulfoxide reductase A 
Protein accessionYP_571536 
Protein GI91978877 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGT CGACCGTGAT GCCGAGCGCC AGCGAAGCGC TGCCGGGCCG TGCTACGCCG 
ATCCCCACTG CGCGCAGCCA TTTCGTCAAC GGCCATCGCA TCCAGCCGCC TTTTCCTGAA
GGACTGGAGC AGGCGGTGTT CGGGCTCGGC TGCTTCTGGG GGGCGGAGCG CAAGTTTTGG
GAACTCGGCG ACGGCGTTTA CAGCACGGCG GTCGGTTATG CCGGCGGCTA CACGCCGAAT
CCGACCTATG AGGAAGTCTG CTCGGGCCGC ACCGGCCACA CCGAAGTGGT GATGGTCGTG
TTCGACCCGA ACAAGGTGTC CTACGAAACG CTGCTGAAGA CGTTCTGGGA AAGCCACGAC
CCGACGCAGG GCATGCGTCA GGGCAATGAC GTCGGCTCGC AATATCGCTC GGCGATCTAC
ACGATCAGCG ACGCGCAGCG AAAGGCCGCC GACGCGTCGC GCGGCGCCTA TCAGCAGGCA
CTCGCCGCCA AGCGGCTCGG GCCGATCACC ACCGAGATCG CACCGGCCGG AGAGTTCTAC
TTCGCCGAGG ACGATCACCA GCAATATCTG GCGAAGAATC CCGGCGGCTA TTGCGGGCTC
GGCGGCACCG GCGTGTCGTG CCCGATCGGC GTCGCCGTCA CCGCCTGA
 
Protein sequence
MRKSTVMPSA SEALPGRATP IPTARSHFVN GHRIQPPFPE GLEQAVFGLG CFWGAERKFW 
ELGDGVYSTA VGYAGGYTPN PTYEEVCSGR TGHTEVVMVV FDPNKVSYET LLKTFWESHD
PTQGMRQGND VGSQYRSAIY TISDAQRKAA DASRGAYQQA LAAKRLGPIT TEIAPAGEFY
FAEDDHQQYL AKNPGGYCGL GGTGVSCPIG VAVTA