| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4395 |
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| Symbol | |
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| ID | 4024920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4861877 |
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| End bp | 4863181 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964604 |
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| Product | major facilitator transporter |
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| Protein accession | YP_571512 |
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| Protein GI | 91978853 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.301682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCCG GGAGGCATCA GTTGGACGGG CAATCCACGC CGAAGGGCGC CTGGAGGATC
ACCTTCCTCC TGTTTCTGTT CATGGTCGTC AATTTCGCCG ACAAGATCGT TGTCGGCCTC
GCCGGCGTGC CGATCACCAG GGAGCTGAAT CTCAGTCCTG AACAGTTCGG GTTGCTCGGC
TCGTCGTTCT TCTTCTTGTT CTCGATCACG GCGATCATCG TCGGCTTCAT CGTCAACCGG
GTCGAGACCC GCTGGGTGCT GCTGATTCTG GCGCTGATCT GGGCGGTGGC GCAGTTTCCG
ATGGTCGGCA CCGTCAGCTT CACCACGCTG CTGATCTGCC GCATCATCCT CGGCGCCGGC
GAGGGACCGG CTTTCGCGGT GGCCGCGCAC GCGATCTACA AATGGTTTCC CGACCACAAG
CGGACGCTGC CGACGGCGAT CCTGTCGCAG GGCTCGGCGT TCGGCGTGAT TCTGGCGGTG
CCGGCGCTGA ACTGGATCAT CGTCAATCAC TCCTGGCACT ACGCCTTCGG CGCGCTCGGT
ATCGTCGGGC TGATGTGGGT GGCGGCGTGG GTCGCGCTCG GCAAAGAGGG CCCGCTGGTT
CCGACTGCGG CGATGGCGGC GGCAGAGACG CGGATTCCCT ATGCGCGACT GCTCACCTCG
CGGACCTTCG TCGGCTGCGT CGCGGCAACC TTCGGCGCCT ATTGGGCGCT GTCGCTCGGG
CTCACTTGGT TCACCACCTA CATTATCAAA GGGCTCGGCT TCAGCCAGCA TCAGGCCGGG
CTGATCTCGA TTATGCCGTG GGTATTCGGC GCCATCGTCG TGTTGTTGGC CGGTTGGCTG
TCGCAGTCGC TGATGGGGCG CGGCGCTTCG ACCAGGCATG CGCGCGGCGT GCTGGGGTCG
GTTCCGCTGG TGGTCGGCGG CCTGATCCTG CTGACGATGC CCTTCATCGA CAACCCGACC
GCGCGGATCG CCGCGCTGGT GATCGGCTCG GGGCTGTGCG GGTCGATCTA CGTGGTGTGC
CCGCCGATGA TCGCCGAATT CGCGCCGGTG TCGCAGCGCG GCGCGGCGAT TGCGATCTAC
GGAGCGCTGT ATACGCTCGC CGGCATCGTC GCGCCGCTGG TGATGGGCAG CGTGGTGCAG
AATGCCGCGT CGCCGAACGA AGGCTATCTC GCAGGCTACG TCATCAACGG TGCGGTGATG
GTCGTGTCGG GTCTGCTCGG CCTGCTGCTG CTGTGGCCGA ACACCGAACG GGCACGGCTG
CTCGGTGTCG AGGATGCCGC GATCGGACTG CGCAAGCCGG CTTGA
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| Protein sequence | MVAGRHQLDG QSTPKGAWRI TFLLFLFMVV NFADKIVVGL AGVPITRELN LSPEQFGLLG
SSFFFLFSIT AIIVGFIVNR VETRWVLLIL ALIWAVAQFP MVGTVSFTTL LICRIILGAG
EGPAFAVAAH AIYKWFPDHK RTLPTAILSQ GSAFGVILAV PALNWIIVNH SWHYAFGALG
IVGLMWVAAW VALGKEGPLV PTAAMAAAET RIPYARLLTS RTFVGCVAAT FGAYWALSLG
LTWFTTYIIK GLGFSQHQAG LISIMPWVFG AIVVLLAGWL SQSLMGRGAS TRHARGVLGS
VPLVVGGLIL LTMPFIDNPT ARIAALVIGS GLCGSIYVVC PPMIAEFAPV SQRGAAIAIY
GALYTLAGIV APLVMGSVVQ NAASPNEGYL AGYVINGAVM VVSGLLGLLL LWPNTERARL
LGVEDAAIGL RKPA
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