Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4376 |
Symbol | |
ID | 4024901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4841944 |
End bp | 4842687 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637964586 |
Product | winged helix family two component transcriptional regulator |
Protein accession | YP_571494 |
Protein GI | 91978835 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA ACCCGCATAT CATCGTTGTC GACGACGAGG CGCCGGCCCG CGAGATGGTC GGCGATTATT TGCGGATGCA CGGCTTCGCC GTGACCCTGT GCGACGGCGG CAAGAGCCTG CGCGCAGAGA TCGAGACCAA GGTCCCCGAC CTCGTGGTGC TCGACCTCAA CATGCCGGAA GAAGACGGCC TGTCGATCAT CCGCGATCTC AAGGCCAAAA CCAATGTGCC GGTGATCATG CTGACCGCGA CCGCGAGCCC GATCGACCGC GTCGTCGGTC TCGAACTCGG CGCTGACGAT TACGTCGCCA AGCCCTGCGA GCTGCGCGAG TTGATGGCGC GTATCCGGTC GGTGCTGCGC CGCTCGGCGC CGAGGCCGAC CGCCGCTCCC GCGCCGGCCG CCACGCCGAC AAAGACCGCC AACGAACAGC TGGTGCGGTT CGGCACCAAA TGGCTCGATC TCGAAGCCCA GGCGCTGCGC GACGACGACG GCAACGAGCA CCCGCTGACG GCGTCGGAAT TCGGCCTTCT GAAAGTGTTC GCGGCCAATC CCAAGCGGGT GCTGTCGCGC GAGCGGCTGC TGGAGCTCGC CAACGCCCGC GACGCCGAGG CGTTCGATCG CGCCGTCGAC CTCCGGATCA TGCGGATTCG GCGCAAGATC GAGCCCGATC CGACCAAACC GGCGGTGATC CGGACCATTC GCGGCGGCGG CTATTTGTTC TCTCCAGCCT CAGACCGACC CTGA
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Protein sequence | MSQNPHIIVV DDEAPAREMV GDYLRMHGFA VTLCDGGKSL RAEIETKVPD LVVLDLNMPE EDGLSIIRDL KAKTNVPVIM LTATASPIDR VVGLELGADD YVAKPCELRE LMARIRSVLR RSAPRPTAAP APAATPTKTA NEQLVRFGTK WLDLEAQALR DDDGNEHPLT ASEFGLLKVF AANPKRVLSR ERLLELANAR DAEAFDRAVD LRIMRIRRKI EPDPTKPAVI RTIRGGGYLF SPASDRP
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