Gene RPD_4327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4327 
Symbol 
ID4024851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4794051 
End bp4794608 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content66% 
IMG OID637964536 
Producthypothetical protein 
Protein accessionYP_571445 
Protein GI91978786 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.457545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTAT CCAATTCGTC CGTCTCCAGG ATGCCCGCGC CGCTTGCCCT TGCGACGCGG 
GTCTTGCCGC TGTTGCCCCT GCAGGTGTTG CTCGGCATTT GCCTGCGGGA GATCCGCAGT
CGTCATCCCC GAATCTTCGA TCGCCTCGGC TCGCACACCG GCAAGCGTTA CGGCCTCGTG
CCGACCGATC TGCCGATCGC GTTCGTGCTC GAGCCGCGGC GGATGAATCC GCGGGTCACG
GTGGTGCGCA AGCTGCCGGC GAATATCGAC GCGCGCATCG CGGGCCCGCT GTCGGCGCTG
ATCGGCATGA CCGACGGTTC GTATGACGGC GACGCGCTGT TCTTCTCGCG CGACATCGAG
ATCGACGGCG ACATGGAAGC GGTGGTCGCG CTGCGCAATG CGATCGACGA TTCGCGCGTC
GATTTCCTCA AGGAGTCGGT CGCGTGGTTC GGCCCGCTGG CGGCGCCGAT CGAGCGAATC
CTGCGCAGCA TCGTAGCCGC GCCGCCGCAA TATCGCGATG AGATGGGCGT CGAAGGCGGA
GGACGATCAT GGAACTGA
 
Protein sequence
MSVSNSSVSR MPAPLALATR VLPLLPLQVL LGICLREIRS RHPRIFDRLG SHTGKRYGLV 
PTDLPIAFVL EPRRMNPRVT VVRKLPANID ARIAGPLSAL IGMTDGSYDG DALFFSRDIE
IDGDMEAVVA LRNAIDDSRV DFLKESVAWF GPLAAPIERI LRSIVAAPPQ YRDEMGVEGG
GRSWN