| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4303 |
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| Symbol | |
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| ID | 4024827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4769506 |
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| End bp | 4770435 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964512 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_571421 |
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| Protein GI | 91978762 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.490284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.261711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC TGTTTCTGAC CCATTCCGCG TGTCTCGAGC ATCATACGCC GGAGGGCCAT
CCCGAACGCG CCGAGCGGCT GATCGCCGTC AACAAAACGC TGACCGCAGA GCGGTTCGCG
ACGCTGGCGC GCGGCGAGGC GCCGATCGGC TCGCTCGAGC ACATCGCGCT GTGCCACACC
GATCACCACA TCGTCGAGAT GCGCCACATG TCGCCCTCGA CCGGCATCGT CTATGTCGAC
GGCGACACCT CGATGTCGCC CGGCACGTTC GAAGCGGCGC TACGCGGCGT CGGCGGCGCG
GTCTCCGCGG TCGACGCGGT GATGAAAGGC AGCGCCGCCA ACGCCTTCGT CGCGACGCGG
CCGCCCGGTC ACCACGCCGA AGTGACCAAG CCGATGGGCT TCTGCTTCTT CGGCAACGCC
GCGATCGCGG CGCGCTACGC CCAGCGCAAA TACGGCATCG AACGCGCCGC GGTGGTGGAT
TTCGACGTCC ATCACGGCAA CGGCACGCAG GACATCTTCT GGGGCGACCG CACCGTGATG
TATTGCTCGA CCCACCAGAT GCCGCTGTTT CCCGGCACCG GCTCGGCCGG CGAACGCGGC
GAGCACGACA ACATCGTCAA CGCCCCGCTC GCCTCGGAAG ACGGCGGCAA GGAATTCCGC
TTCGCGTTCG AGACCGCGAT CCTGCCCCAG CTCAAGCGCT TCGCGCCGGA ACTGATCGTG
ATCTCCGCCG GCTTCGACGC GCACTACCGC GACCCGCTGG CGAGCCTCAA TCTGCACGCC
GAGGATTTCG CCTGGGTGAC GCAGCAGCTG ATGGAGGTCG CCGACCAGAC CGCGGGCGGT
CGCATTGTTT CGGTGCTCGA GGGCGGCTAT GATCTGCAGG GCCTGAGTGA ATCAGTCGCC
GCCCATGTCG GCGCGCTGAT GGGCGCCTGA
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| Protein sequence | MTTLFLTHSA CLEHHTPEGH PERAERLIAV NKTLTAERFA TLARGEAPIG SLEHIALCHT
DHHIVEMRHM SPSTGIVYVD GDTSMSPGTF EAALRGVGGA VSAVDAVMKG SAANAFVATR
PPGHHAEVTK PMGFCFFGNA AIAARYAQRK YGIERAAVVD FDVHHGNGTQ DIFWGDRTVM
YCSTHQMPLF PGTGSAGERG EHDNIVNAPL ASEDGGKEFR FAFETAILPQ LKRFAPELIV
ISAGFDAHYR DPLASLNLHA EDFAWVTQQL MEVADQTAGG RIVSVLEGGY DLQGLSESVA
AHVGALMGA
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