Gene RPD_4256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4256 
Symbol 
ID4024777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4724545 
End bp4725363 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID637964462 
Producthypothetical protein 
Protein accessionYP_571374 
Protein GI91978715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.430021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.412838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCCA TCGGATTAGC GGCGCTGCTA ACGCTTGTGC TCTGCACAAT GGCGTTCAAG 
GCTCAGGCCC AGGACGCGAG CGAAAAGGAA ATCGAGCGTT ATCGCGCGAT GATCTCCGAT
CCGATGTCCA ATCCCGGCTT CCTTGCAGTC GACCGCGGCG AGCAGCTCTG GGCCGAGAAG
CGCGGCGCCA AGAACGTCTC GCTCGAAGGT TGCGACCTCG GTCTCGGCGC CGGAAAGCTC
GAAGGCGTTT ATGCGCAGCT GCCACGCTAC TTCAAGGACG CCGACAGGGT CATGGACCTC
GAGCAACGCC TGTTGTGGTG TATGCAGAAT GTCCAGGGCC TCGACACCAA GGACGTCGTG
ACCCGCCGCT TTTCCGGTCC TGGCCGGGTC TCCGATATGG AGGACCTGGT CGCCTACATC
GCTAACAAGT CGAGCGGCAT GAAGATCGCG CCGCAGCTCG GCCATCCCAA GGAGCAGGAG
ATGCTCGCGG TCGGCGAGGA GATGTTCTAT CGCCGCGCCG GCGTGATGGA TTTCGCTTGC
GCGACCTGTC ACGGCAGCGA GGGCAAGCGG ATTCGGCTGC AGGCGCTGCC GGACCTCGCC
AAGCCCGGCA AGGAGCCGCA GGACACGATG GGGTCGTGGC CGACCTATCG GGTTTCGCAG
GGCGCGCTGC GCACGATGCA GCACCGGCTA TGGGACTGCT TCCGCCAGCA GCGCTGGCCC
GCGCCCGAAT ACGGCTCCGA CGGCATCACC GCGCTGACCA TGTATCTCAA CACGATGGCA
TCGGGCGGCG AGATCACCGT CCCCTCGATC AAGCGCTGA
 
Protein sequence
MRPIGLAALL TLVLCTMAFK AQAQDASEKE IERYRAMISD PMSNPGFLAV DRGEQLWAEK 
RGAKNVSLEG CDLGLGAGKL EGVYAQLPRY FKDADRVMDL EQRLLWCMQN VQGLDTKDVV
TRRFSGPGRV SDMEDLVAYI ANKSSGMKIA PQLGHPKEQE MLAVGEEMFY RRAGVMDFAC
ATCHGSEGKR IRLQALPDLA KPGKEPQDTM GSWPTYRVSQ GALRTMQHRL WDCFRQQRWP
APEYGSDGIT ALTMYLNTMA SGGEITVPSI KR