Gene RPD_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4246 
Symbol 
ID4024767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4714602 
End bp4715276 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID637964452 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_571364 
Protein GI91978705 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.35717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG CTGTTTCGTT ATCGATGCCG CTCCGGTTAT TTGCGCTCGC CGGCATTGCC 
GTCGCGCTCG GCGGCTGCGT CACGCGGTCC GAAGCCGAGC TGGGCCTTGC TCCATTGACC
AGCACCGTCG CCCCGGCGGT CGCTGCGCGC TACGCCGCGA TCGACACCGA CAAATACCCG
ATCCCCGGCG TCGACCCGAG CGAGTTGCAG CCGGCCTATG TCCGGCAACT GGTCGCGTAC
AAGACCAACG AGCCGCCGGG GACCGTCGTG GTCGATCCGC GCCAGCGCTT TCTCTATCTC
GTGATGGAGG GCGGCGAGGC GCTGCGCTAT GGCGTCGGCG TCGGCAAGGC CGGGCTGGAA
TTCACCGGCA CCGCTAATGT CGGACGCAAA GCCGCGTGGC CGAATTGGAC GCCGACGCAG
GGCATGATCG CGCGCGAACC GCAGCGCTAC GGCAAATGGG CAAAAGGCAT GAGCGGCGGC
GCCAACAATC CGCTCGGCCC GCGGGCGCTG TATCTGTTCA AGGACGGCAA GGATACGCTG
TACCGGATTC ACGGCACCAC GGAGCCCGAG ACGATCGGCA CGGCGGTCTC GTCCGGCTGC
ATCCGGATGC TGAATCAGGA TATCATCGAC CTCTACAGTC GGGTGCCGAA GGGCTCGAAA
GTCGTCGTCA AATAG
 
Protein sequence
MTVAVSLSMP LRLFALAGIA VALGGCVTRS EAELGLAPLT STVAPAVAAR YAAIDTDKYP 
IPGVDPSELQ PAYVRQLVAY KTNEPPGTVV VDPRQRFLYL VMEGGEALRY GVGVGKAGLE
FTGTANVGRK AAWPNWTPTQ GMIAREPQRY GKWAKGMSGG ANNPLGPRAL YLFKDGKDTL
YRIHGTTEPE TIGTAVSSGC IRMLNQDIID LYSRVPKGSK VVVK