Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4246 |
Symbol | |
ID | 4024767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4714602 |
End bp | 4715276 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637964452 |
Product | ErfK/YbiS/YcfS/YnhG |
Protein accession | YP_571364 |
Protein GI | 91978705 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.35717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTTG CTGTTTCGTT ATCGATGCCG CTCCGGTTAT TTGCGCTCGC CGGCATTGCC GTCGCGCTCG GCGGCTGCGT CACGCGGTCC GAAGCCGAGC TGGGCCTTGC TCCATTGACC AGCACCGTCG CCCCGGCGGT CGCTGCGCGC TACGCCGCGA TCGACACCGA CAAATACCCG ATCCCCGGCG TCGACCCGAG CGAGTTGCAG CCGGCCTATG TCCGGCAACT GGTCGCGTAC AAGACCAACG AGCCGCCGGG GACCGTCGTG GTCGATCCGC GCCAGCGCTT TCTCTATCTC GTGATGGAGG GCGGCGAGGC GCTGCGCTAT GGCGTCGGCG TCGGCAAGGC CGGGCTGGAA TTCACCGGCA CCGCTAATGT CGGACGCAAA GCCGCGTGGC CGAATTGGAC GCCGACGCAG GGCATGATCG CGCGCGAACC GCAGCGCTAC GGCAAATGGG CAAAAGGCAT GAGCGGCGGC GCCAACAATC CGCTCGGCCC GCGGGCGCTG TATCTGTTCA AGGACGGCAA GGATACGCTG TACCGGATTC ACGGCACCAC GGAGCCCGAG ACGATCGGCA CGGCGGTCTC GTCCGGCTGC ATCCGGATGC TGAATCAGGA TATCATCGAC CTCTACAGTC GGGTGCCGAA GGGCTCGAAA GTCGTCGTCA AATAG
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Protein sequence | MTVAVSLSMP LRLFALAGIA VALGGCVTRS EAELGLAPLT STVAPAVAAR YAAIDTDKYP IPGVDPSELQ PAYVRQLVAY KTNEPPGTVV VDPRQRFLYL VMEGGEALRY GVGVGKAGLE FTGTANVGRK AAWPNWTPTQ GMIAREPQRY GKWAKGMSGG ANNPLGPRAL YLFKDGKDTL YRIHGTTEPE TIGTAVSSGC IRMLNQDIID LYSRVPKGSK VVVK
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