Gene RPD_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4187 
Symbol 
ID4024708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4653769 
End bp4654074 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content69% 
IMG OID637964393 
Producthypothetical protein 
Protein accessionYP_571305 
Protein GI91978646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.519956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG TGGTGCTGAC CCTGATCGCG CCGACAGCGG TGAAAGAGGA ACTGGTCGCT 
GCGATGCTCG CCCACCCGCA GACCGCGCAG GCCGGCTTCA TCGCGCGCGA GATCGAGGGC
TATGGCAACA GCGCCGATTG CGACAGCGTG GTCGAGCAGG TTCGCGGCCA TGCGCTGGCC
GTCGAGATCG CGCTCACCGT ATCGGAAGCC GACGCGCGCA GCCTGCTCGC TGCGCTCGGC
GAGGAATTCT CCCGCAGCGG CGTGATCTGG CGCATGATGG CGGCGACGGC GTCCGGGACG
CTGTGA
 
Protein sequence
MSLVVLTLIA PTAVKEELVA AMLAHPQTAQ AGFIAREIEG YGNSADCDSV VEQVRGHALA 
VEIALTVSEA DARSLLAALG EEFSRSGVIW RMMAATASGT L