| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4137 |
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| Symbol | |
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| ID | 4024659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4605919 |
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| End bp | 4607412 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964345 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_571257 |
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| Protein GI | 91978598 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATAT TGATGCCGGA ACCGGACCAG TCCGTGCTGG CGCGCCGCGA CCAGATCGTG
GCGGCGTTGC GCAAGATCGT GCCGGGCGAG GGCGTCATTT CCAGCGCCGC CGAGATGAAG
CCCTATGAGT CCGACGGGCT GATGGCGTAT CGCCAGCCGC CGATGGTGGT GGTGCTGCCG
GGCACGACGC AGCAGGTCTC CGAGGTTCTT CGCTACTGCC ACAAGCACGG CATCAAGGTG
GTGCCGCGCG GTTCTGGCAC CTCGCTATCG GGCGGCGCTT TGCCGCTCGC CGACGGCGTG
TTGCTGGGGC TCGGCAAGTT CAAGCGCATC CGTGAGATTG ATTTCGATAA CCGCGCAGTG
GTGGTCGAGC CCGGCGTCAC CAACCTCGCC ATCAGCCAGG CAGTCGACCA CGCCGGCTTT
TACTACGCGC CCGATCCGTC GTCGCAGATC GCCTGTTCGA TCGGCGGCAA TATCGCGGAG
AATTCCGGCG GCGTGCATTG CCTGAAATAC GGCATGACCA CCAATAACGT GCTCGGCTGC
GAGATCGTGC TGATGACCGG CGAGATCCTG CGGATCGGCG GCAAGGCTGC CGAGTGCGCG
GGCTACGATC TGATGGGCGT GATCACCGGC TCCGAGGGGC TGCTCGGCGT CATCACCGAG
GTCACCGTCC GCATCCTGCG CAAGCCGGAG ACCGCGCGGG CGCTGATGGT CGGCTTCACC
GACGTCGAGG CCGCCGGCCG ATGCGTCGCC GACATCATCA GCGCCGGCAT CATCCCCGGC
GGCATGGAGA TGATGGACCG GCCGGCGATC CACGCCGCCG AAGCCTTCGT CCACGCCGGC
TATCCGCTCG ACGTCGAGGC GCTGCTGATC ATCGAGCTCG ACGGCCCGCA GGTCGAGGTC
GACGAACTGA TCACGCGCGT CGAGACGATT GCGCTCGGCT GCGGCTCGAC CACCTGCCAG
ATCTCGACGT CGGAAAAGGA GCGGTTGCTG TTCTGGTCCG GCCGCAAGGC GGCGTTCCCG
GCGGTCGGCC GGATTTCGCC GGACTATCTG TGCATGGACG GCACCATTCC GCGCGCGAAG
TTGCCGCAGG TATTGCGGCG GATGACCGAG ATGTCGGAGC ACTACGGGCT GCGCGTCGCC
AATGTGTTCC ACGCCGGCGA CGGCAATCTG CATCCGCTGA TCCTCTACGA CGCCAATCAG
CCCGGCGAGA TGGACAAGGC CGAGGCGTTC GGGGCCGACA TCCTGCGGCT GTGCGTCGAG
GTCGGCGGCG TGCTGACCGG CGAGCATGGC GTCGGGATCG AGAAGCGCGA TCTGATGCCG
GAGATGTTCT CCGACATCGA TCTCAATCAG CAGCAGCGGT TGAAATGCGC ATTCGATTCC
GAAGGCCTGC TCAATCCCGG CAAGGTGTTC CCGACGCTGC ATCGCTGCGC CGAACTCGGC
CGGATGCACG TCCATGGCGG CAAGACGGCG TTTCCGGATA TCCCGCGTTT CTGA
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| Protein sequence | MTILMPEPDQ SVLARRDQIV AALRKIVPGE GVISSAAEMK PYESDGLMAY RQPPMVVVLP
GTTQQVSEVL RYCHKHGIKV VPRGSGTSLS GGALPLADGV LLGLGKFKRI REIDFDNRAV
VVEPGVTNLA ISQAVDHAGF YYAPDPSSQI ACSIGGNIAE NSGGVHCLKY GMTTNNVLGC
EIVLMTGEIL RIGGKAAECA GYDLMGVITG SEGLLGVITE VTVRILRKPE TARALMVGFT
DVEAAGRCVA DIISAGIIPG GMEMMDRPAI HAAEAFVHAG YPLDVEALLI IELDGPQVEV
DELITRVETI ALGCGSTTCQ ISTSEKERLL FWSGRKAAFP AVGRISPDYL CMDGTIPRAK
LPQVLRRMTE MSEHYGLRVA NVFHAGDGNL HPLILYDANQ PGEMDKAEAF GADILRLCVE
VGGVLTGEHG VGIEKRDLMP EMFSDIDLNQ QQRLKCAFDS EGLLNPGKVF PTLHRCAELG
RMHVHGGKTA FPDIPRF
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