Gene RPD_4120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4120 
Symbol 
ID4024642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4585084 
End bp4585989 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID637964328 
ProductYdjC-like protein 
Protein accessionYP_571240 
Protein GI91978581 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CTGCGCCACG GCGGATCTGG CTGTGCGCCG ACGATTACGG CATCAGTCCC 
GGCGTCAACC GCGCGATCCG CGATCTGATC GAACGCCGGC GCATCAACGC CACCTCGGTG
ATGATGGTGG GGAGTGCGAT CGGCCGCGAC GATGTCCGCG CGCTGCTCGA CGCCACCGCC
GACAATCCCG GCTGCGCCAT CGGACTTCAC GCGACGCTGA CCGCGCCGTT CTCGCCGCTG
ACGATGCACT ATCACCCGCT GCATGGCGGG ATGTTCCTGC CGCTCGGCCG CAAGCTGCGC
GGCGCCCTGC TGCGCCGGCA CGACCGGCAC GTCATTGCGA TGGAGCTGAC GGCGCAGCTC
GAAGCCTTCG CCGAGCGGTT CGGCCGGATG CCGGACTATG TCGACGGCCA TCAGCACGTG
CAGCTGTTTC CGCAGGTCCG CGACGCATTC GTCAGCGTGG TGAAGGCGGT GGCGCCGAAC
GCCTGGGTTC GGCAATGCGG CCGGGCGCAA CCGCTGGCGC AACGGCTCGG TGCGCCGAAG
CCGCTGCTGC TCGACGTGCT CAGCCGGCAA TTCCGGATCC GCGCCACGCG CGCCGGGATC
GCGTTCAATC CAGGCTTTGC AGGCGCCTAT GACTTCCTGC GCGAGAGCGA CTTCGAGAAA
CTGCTGATCT CGTTCTTCGA CGGCCTGCCC GACGGCGGAC TGGTGATGTG TCATCCCGGC
TTCGTCGACG AGGTCCTGAC CAGCCTCGAT CCGTTCACCG ATCAGCGCGA ACGCGAGCAC
GCCTTTCTCG CCGGCGACCG CTTCCTGCCG CTGCTCGCCG CGCATAATGT GACGCTTGAT
GTGACAGTTG CGAGTAACTC CGAAGTCACT CCAGCGCCGG TCGTTCGGCT GCCTACCGAA
AATTAA
 
Protein sequence
MSEAAPRRIW LCADDYGISP GVNRAIRDLI ERRRINATSV MMVGSAIGRD DVRALLDATA 
DNPGCAIGLH ATLTAPFSPL TMHYHPLHGG MFLPLGRKLR GALLRRHDRH VIAMELTAQL
EAFAERFGRM PDYVDGHQHV QLFPQVRDAF VSVVKAVAPN AWVRQCGRAQ PLAQRLGAPK
PLLLDVLSRQ FRIRATRAGI AFNPGFAGAY DFLRESDFEK LLISFFDGLP DGGLVMCHPG
FVDEVLTSLD PFTDQREREH AFLAGDRFLP LLAAHNVTLD VTVASNSEVT PAPVVRLPTE
N