Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4120 |
Symbol | |
ID | 4024642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4585084 |
End bp | 4585989 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637964328 |
Product | YdjC-like protein |
Protein accession | YP_571240 |
Protein GI | 91978581 |
COG category | [S] Function unknown |
COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAGG CTGCGCCACG GCGGATCTGG CTGTGCGCCG ACGATTACGG CATCAGTCCC GGCGTCAACC GCGCGATCCG CGATCTGATC GAACGCCGGC GCATCAACGC CACCTCGGTG ATGATGGTGG GGAGTGCGAT CGGCCGCGAC GATGTCCGCG CGCTGCTCGA CGCCACCGCC GACAATCCCG GCTGCGCCAT CGGACTTCAC GCGACGCTGA CCGCGCCGTT CTCGCCGCTG ACGATGCACT ATCACCCGCT GCATGGCGGG ATGTTCCTGC CGCTCGGCCG CAAGCTGCGC GGCGCCCTGC TGCGCCGGCA CGACCGGCAC GTCATTGCGA TGGAGCTGAC GGCGCAGCTC GAAGCCTTCG CCGAGCGGTT CGGCCGGATG CCGGACTATG TCGACGGCCA TCAGCACGTG CAGCTGTTTC CGCAGGTCCG CGACGCATTC GTCAGCGTGG TGAAGGCGGT GGCGCCGAAC GCCTGGGTTC GGCAATGCGG CCGGGCGCAA CCGCTGGCGC AACGGCTCGG TGCGCCGAAG CCGCTGCTGC TCGACGTGCT CAGCCGGCAA TTCCGGATCC GCGCCACGCG CGCCGGGATC GCGTTCAATC CAGGCTTTGC AGGCGCCTAT GACTTCCTGC GCGAGAGCGA CTTCGAGAAA CTGCTGATCT CGTTCTTCGA CGGCCTGCCC GACGGCGGAC TGGTGATGTG TCATCCCGGC TTCGTCGACG AGGTCCTGAC CAGCCTCGAT CCGTTCACCG ATCAGCGCGA ACGCGAGCAC GCCTTTCTCG CCGGCGACCG CTTCCTGCCG CTGCTCGCCG CGCATAATGT GACGCTTGAT GTGACAGTTG CGAGTAACTC CGAAGTCACT CCAGCGCCGG TCGTTCGGCT GCCTACCGAA AATTAA
|
Protein sequence | MSEAAPRRIW LCADDYGISP GVNRAIRDLI ERRRINATSV MMVGSAIGRD DVRALLDATA DNPGCAIGLH ATLTAPFSPL TMHYHPLHGG MFLPLGRKLR GALLRRHDRH VIAMELTAQL EAFAERFGRM PDYVDGHQHV QLFPQVRDAF VSVVKAVAPN AWVRQCGRAQ PLAQRLGAPK PLLLDVLSRQ FRIRATRAGI AFNPGFAGAY DFLRESDFEK LLISFFDGLP DGGLVMCHPG FVDEVLTSLD PFTDQREREH AFLAGDRFLP LLAAHNVTLD VTVASNSEVT PAPVVRLPTE N
|
| |