| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4114 |
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| Symbol | ubiA |
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| ID | 4024636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4578953 |
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| End bp | 4579903 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964322 |
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| Product | 4-hydroxybenzoate polyprenyltransferase |
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| Protein accession | YP_571234 |
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| Protein GI | 91978575 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.82541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGCG TCCCGATCAG CGGCGCGACG GCGCCGGTTG CCGATTCGAC CGGCAACTGG
GTCGACAGCC ACGCGCCGGA ATGGTCGCGG CCCTATTTGC GTCTGGCGCG GTTCGATCGT
CCGATCGGCT CCTGGCTGCT GCTGCTGCCG TGCTGGTGGT CGGCGGCGCT GGCGGCCGGC
ATCGCCAAGG ATCTCAGCCA CCTCGCGCTG TTCTGCGCGC TGTTTTTCGT CGGCGCGTTC
GTGATGCGCG GCGCCGGCTG CACCTGGAAC GACATCACCG ACCGCAACCT CGACGGCAAG
GTCGAGCGCA CCCGGTCGCG GCCGATTCCA TCGGGGCAGG TCACGGCCAG GCAGGCCGCC
GCCTTCATGG TGCTGCTGTC GCTGATCGGT CTGGCGGTGC TGCTGCAGTT CAACGCTTTC
GCGATCGCGA CCGGCATCTC GTCGCTGATC ATCGTCGCGG CCTATCCGTT CATGAAGCGG
ATCACCTATT GGCCGCAGAT CGTGCTCGGT CTCGCCTTCT CGTGGGGCGC GCTGATGGGC
TTCGCCGTCA CCTTCGCGCG GCTCGATCTG GTGGCCTTCG TGCTCTACGC CGGTTCGATC
GTGTGGGTGG TCGGTTACGA CACGATCTAC GCGCACCAGG ACGCCGAGGA CGATCTCATG
ATCGGCATCA AGTCCACCGC GCTGCTGTTC GGTGCGAAGA CCCAGACCGC GCTGCTGATC
CTGTACGGTC TCGCGGTGAC GCTGATCGGC ACGGCCTTGA TGCTGGCGGG CTCCGGATGG
CTCGGCTGGA TCGGTCTCGC CGCCTTCGCG ATTCATCTCG GCTGGCAGAT CGTGCGGCTC
GATATTCGCG ACAGCAGGCT GTGCCTGAAA CTGTTCAAGT CGAATCGCGA CGCAGGCCTG
CTGCTGTTCA TCGGCCTCGT TTGCGACGCG GTGCTGCGGA CGATGGCGTA A
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| Protein sequence | MSGVPISGAT APVADSTGNW VDSHAPEWSR PYLRLARFDR PIGSWLLLLP CWWSAALAAG
IAKDLSHLAL FCALFFVGAF VMRGAGCTWN DITDRNLDGK VERTRSRPIP SGQVTARQAA
AFMVLLSLIG LAVLLQFNAF AIATGISSLI IVAAYPFMKR ITYWPQIVLG LAFSWGALMG
FAVTFARLDL VAFVLYAGSI VWVVGYDTIY AHQDAEDDLM IGIKSTALLF GAKTQTALLI
LYGLAVTLIG TALMLAGSGW LGWIGLAAFA IHLGWQIVRL DIRDSRLCLK LFKSNRDAGL
LLFIGLVCDA VLRTMA
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