Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4071 |
Symbol | |
ID | 4024588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4524169 |
End bp | 4524786 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637964274 |
Product | hypothetical protein |
Protein accession | YP_571191 |
Protein GI | 91978532 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.261199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACCGATC TGCACTCCTA CGAACCGGTG AATGGCCACG GCCTCAAGCA TGATCCCTTC AACGCCATCA TAGCGCCGCG GCCGATCGGC TGGATTTCGT CCAGCGATGC CAAGGGCAAC GTCAATCTCG CGCCTTACAG CTTTTTCAAC GCCTTCAACT ACACGCCGCC GCTGATCGGC TTTTCCTCGA CGACATGGAA GGACACTGTC GCCAACATCC AGGAAACCGG CGAATTCGTC TGGAACCTGG TGACGATGGA ATTGGCTCCG GCGATGAATG CGACGTCCGC GACCGTGCCG CACGAAGTCG ACGAGTTCAC TCTCGGCAAC CTCACCAAGC TGCCGAGCCG GCTGGTGAAG CCGCCGCGGG TCGCCGAAAG CCCGGTGTCG TTCGAGTGCC GGTTGTCGGA GATCATCCAG CTGAAGGGCG CCGATGGTGC GCGGGCTGAA GCCTGGCTGA CGATCGGCGA AGTGGTCGCG GTGCATATCG ACAAGCGGCT GATCCAGGAT GGCGTCTACC AAACCGCGCT GGCGCATCCG ATCATGCGCG CCGGGCGCCG CGGCGATTAT TTCGAGATCA GGCCCGACGC GATGTTCGAA ATGCCGCGTC CGGCCTGA
|
Protein sequence | MTDLHSYEPV NGHGLKHDPF NAIIAPRPIG WISSSDAKGN VNLAPYSFFN AFNYTPPLIG FSSTTWKDTV ANIQETGEFV WNLVTMELAP AMNATSATVP HEVDEFTLGN LTKLPSRLVK PPRVAESPVS FECRLSEIIQ LKGADGARAE AWLTIGEVVA VHIDKRLIQD GVYQTALAHP IMRAGRRGDY FEIRPDAMFE MPRPA
|
| |