Gene RPD_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4071 
Symbol 
ID4024588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4524169 
End bp4524786 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content62% 
IMG OID637964274 
Producthypothetical protein 
Protein accessionYP_571191 
Protein GI91978532 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.261199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGATC TGCACTCCTA CGAACCGGTG AATGGCCACG GCCTCAAGCA TGATCCCTTC 
AACGCCATCA TAGCGCCGCG GCCGATCGGC TGGATTTCGT CCAGCGATGC CAAGGGCAAC
GTCAATCTCG CGCCTTACAG CTTTTTCAAC GCCTTCAACT ACACGCCGCC GCTGATCGGC
TTTTCCTCGA CGACATGGAA GGACACTGTC GCCAACATCC AGGAAACCGG CGAATTCGTC
TGGAACCTGG TGACGATGGA ATTGGCTCCG GCGATGAATG CGACGTCCGC GACCGTGCCG
CACGAAGTCG ACGAGTTCAC TCTCGGCAAC CTCACCAAGC TGCCGAGCCG GCTGGTGAAG
CCGCCGCGGG TCGCCGAAAG CCCGGTGTCG TTCGAGTGCC GGTTGTCGGA GATCATCCAG
CTGAAGGGCG CCGATGGTGC GCGGGCTGAA GCCTGGCTGA CGATCGGCGA AGTGGTCGCG
GTGCATATCG ACAAGCGGCT GATCCAGGAT GGCGTCTACC AAACCGCGCT GGCGCATCCG
ATCATGCGCG CCGGGCGCCG CGGCGATTAT TTCGAGATCA GGCCCGACGC GATGTTCGAA
ATGCCGCGTC CGGCCTGA
 
Protein sequence
MTDLHSYEPV NGHGLKHDPF NAIIAPRPIG WISSSDAKGN VNLAPYSFFN AFNYTPPLIG 
FSSTTWKDTV ANIQETGEFV WNLVTMELAP AMNATSATVP HEVDEFTLGN LTKLPSRLVK
PPRVAESPVS FECRLSEIIQ LKGADGARAE AWLTIGEVVA VHIDKRLIQD GVYQTALAHP
IMRAGRRGDY FEIRPDAMFE MPRPA